Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.83□□□□□ -1.64
BLOC1S4Q9NUP1 LINC01355-201ENST00000566551 5444 ntBASIC4.83□□□□□ -1.64
BLOC1S4Q9NUP1 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
BLOC1S4Q9NUP1 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
BLOC1S4Q9NUP1 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.83□□□□□ -1.64
BLOC1S4Q9NUP1 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 AL122126.1-201ENST00000546905 1318 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 U3.15-201ENST00000365398 212 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 OR1L1-202ENST00000373686 1083 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 RNU6-356P-201ENST00000384140 107 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 RPS4XP9-201ENST00000405151 780 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 SNORA11B-201ENST00000408175 129 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 AC069218.2-201ENST00000411665 344 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 RPS12P23-201ENST00000419579 400 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 AL157831.1-201ENST00000426134 473 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 OR4F13P-201ENST00000428478 931 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 PSMA2P3-201ENST00000429685 675 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 RPS29P17-201ENST00000430795 166 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 AC010881.1-201ENST00000433830 235 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 YWHAZP8-201ENST00000436935 731 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 PHBP16-201ENST00000446318 950 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 BX276092.4-201ENST00000452056 248 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 RPL23AP24-201ENST00000458203 385 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 AC146507.1-201ENST00000468335 354 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 AC087879.1-201ENST00000474343 374 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 RN7SL810P-201ENST00000493031 276 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 RN7SL691P-201ENST00000494487 301 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 AC104164.2-201ENST00000496953 495 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 AC069306.1-201ENST00000507006 843 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 RN7SKP277-201ENST00000516895 283 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 PHBP17-201ENST00000528576 541 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 AL109766.1-201ENST00000555080 552 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 AGGF1P6-201ENST00000569213 976 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 MIR4700-201ENST00000578311 74 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 Z82195.1-201ENST00000604558 398 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 VN1R7P-201ENST00000619242 903 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 AC124312.6-202ENST00000623624 418 ntBASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
BLOC1S4Q9NUP1 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 RNU1-15P-201ENST00000353977 144 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 RNA5SP175-201ENST00000364275 119 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 MIR124-3-201ENST00000384866 87 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 RNU6-1176P-201ENST00000390955 107 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 AL603865.2-201ENST00000401679 213 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 SFR1P1-201ENST00000403720 688 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 RNA5SP146-201ENST00000410743 123 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 RN7SKP216-201ENST00000411050 312 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 SFR1P2-201ENST00000421841 730 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 AC073335.1-201ENST00000427776 363 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 AC068287.1-201ENST00000430283 295 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 Z99714.1-201ENST00000450463 807 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 RPL37P6-202ENST00000464216 403 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 AC087385.1-201ENST00000475062 312 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 OR4C2P-201ENST00000530855 1064 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 AC006064.5-201ENST00000541782 248 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 MIR4666A-201ENST00000580160 79 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms