Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 RPS3AP12-201ENST00000443616 753 ntBASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 SETD6P1-201ENST00000444575 317 ntBASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 ELOCP35-201ENST00000604289 336 ntBASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 Z82195.1-201ENST00000604558 398 ntBASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 LINC00561-201ENST00000565815 2738 ntBASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 AC073073.2-201ENST00000609827 2578 ntBASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 AL035458.1-201ENST00000433096 585 ntBASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 RPL21P12-201ENST00000559810 515 ntBASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 AC087468.1-201ENST00000604365 630 ntBASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 AC005972.3-201ENST00000606304 481 ntBASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 AL159169.3-201ENST00000608871 561 ntBASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 AL354976.1-201ENST00000613843 387 ntBASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 AC007342.8-201ENST00000623278 678 ntBASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 SAGE2P-201ENST00000420011 2126 ntBASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 AC007656.2-201ENST00000624902 4547 ntBASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 HSFY4P-201ENST00000415994 1181 ntBASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 BX510359.1-201ENST00000456973 237 ntBASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 NPM1P17-201ENST00000479221 602 ntBASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 AC069499.1-201ENST00000489433 509 ntBASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 MFSD8-233ENST00000641482 4860 ntBASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 AC093311.1-201ENST00000506586 2021 ntBASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KIAA1549Q9HCM3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
KIAA1549Q9HCM3 CRYBB2P1-203ENST00000415709 538 ntBASIC3.21□□□□□ -1.89
KIAA1549Q9HCM3 AC017083.1-201ENST00000428093 483 ntBASIC3.21□□□□□ -1.89
KIAA1549Q9HCM3 AL158071.1-201ENST00000430315 461 ntBASIC3.21□□□□□ -1.89
KIAA1549Q9HCM3 AC127537.2-201ENST00000439258 465 ntBASIC3.21□□□□□ -1.89
KIAA1549Q9HCM3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
KIAA1549Q9HCM3 PRDX3P3-201ENST00000447765 522 ntBASIC3.21□□□□□ -1.89
KIAA1549Q9HCM3 AC005229.2-201ENST00000456995 399 ntBASIC3.21□□□□□ -1.89
KIAA1549Q9HCM3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.21□□□□□ -1.89
KIAA1549Q9HCM3 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.21□□□□□ -1.89
KIAA1549Q9HCM3 SNORA74D-201ENST00000516404 141 ntBASIC3.21□□□□□ -1.89
KIAA1549Q9HCM3 NARSP2-201ENST00000518524 679 ntBASIC3.21□□□□□ -1.89
KIAA1549Q9HCM3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.21□□□□□ -1.89
KIAA1549Q9HCM3 AC020914.4-201ENST00000597690 277 ntBASIC3.21□□□□□ -1.89
KIAA1549Q9HCM3 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.21□□□□□ -1.89
KIAA1549Q9HCM3 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.21□□□□□ -1.89
KIAA1549Q9HCM3 AP003499.2-201ENST00000624100 483 ntBASIC3.21□□□□□ -1.89
KIAA1549Q9HCM3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.21□□□□□ -1.89
KIAA1549Q9HCM3 AC027287.1-201ENST00000553115 1453 ntBASIC3.21□□□□□ -1.89
KIAA1549Q9HCM3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
KIAA1549Q9HCM3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 AC006504.1-201ENST00000562493 3666 ntBASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 OR52E6-202ENST00000379946 954 ntBASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 SNORA11.1-201ENST00000408133 129 ntBASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 AC239809.1-201ENST00000450470 217 ntBASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 SETP6-201ENST00000479329 568 ntBASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 AC008489.1-201ENST00000524271 483 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms