Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 AL352979.3-201ENST00000553515 247 ntBASIC4.5□□□□□ -1.69
PCDH9Q9HC56 OR4U1P-201ENST00000554958 912 ntBASIC4.5□□□□□ -1.69
PCDH9Q9HC56 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 CCDC58P3-201ENST00000590792 430 ntBASIC4.5□□□□□ -1.69
PCDH9Q9HC56 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 AC025811.1-201ENST00000604312 472 ntBASIC4.5□□□□□ -1.69
PCDH9Q9HC56 AC019193.2-201ENST00000610012 634 ntBASIC4.5□□□□□ -1.69
PCDH9Q9HC56 AC009237.15-201ENST00000610252 501 ntBASIC4.5□□□□□ -1.69
PCDH9Q9HC56 AC012409.3-201ENST00000611343 981 ntBASIC4.5□□□□□ -1.69
PCDH9Q9HC56 AC021755.4-201ENST00000616620 456 ntBASIC4.5□□□□□ -1.69
PCDH9Q9HC56 STMN1P1-201ENST00000617809 440 ntBASIC4.5□□□□□ -1.69
PCDH9Q9HC56 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 ZNF663P-202ENST00000641770 1131 ntBASIC4.5□□□□□ -1.69
PCDH9Q9HC56 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 AL137100.1-201ENST00000556703 1620 ntBASIC4.5□□□□□ -1.69
PCDH9Q9HC56 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 CASC19-284ENST00000642142 1868 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 AC009313.2-201ENST00000417893 1941 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 HSPD1P16-201ENST00000402302 394 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 SNRPFP1-201ENST00000414761 252 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 KRR1P1-201ENST00000419430 803 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 GAPDHP49-201ENST00000421421 961 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 AC010099.3-201ENST00000423896 409 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 CNOT7P1-201ENST00000429006 852 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 EEF1A1P39-201ENST00000440791 250 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 CEACAMP9-201ENST00000442990 513 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 HMGB3P6-201ENST00000444896 598 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 CDC42P1-201ENST00000456658 548 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 AC053481.1-201ENST00000467217 306 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 AC091860.1-201ENST00000505723 432 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 OR5M7P-201ENST00000526140 972 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 MIR4700-201ENST00000578311 74 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 MIR4715-201ENST00000584117 79 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 AC123786.2-201ENST00000603459 275 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 AC009948.4-201ENST00000604692 675 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 AC019226.2-201ENST00000625973 424 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 AC090897.3-201ENST00000636973 1157 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDH9Q9HC56 AC011266.1-201ENST00000624119 3569 ntBASIC4.49□□□□□ -1.69
PCDH9Q9HC56 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDH9Q9HC56 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PCDH9Q9HC56 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDH9Q9HC56 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
PCDH9Q9HC56 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDH9Q9HC56 AC092079.1-201ENST00000558620 1985 ntBASIC4.48□□□□□ -1.69
PCDH9Q9HC56 IGKV7-3-201ENST00000357453 298 ntBASIC4.48□□□□□ -1.69
PCDH9Q9HC56 RNU1-130P-201ENST00000363930 160 ntBASIC4.48□□□□□ -1.69
PCDH9Q9HC56 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDH9Q9HC56 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PCDH9Q9HC56 AL136310.1-201ENST00000404926 654 ntBASIC4.48□□□□□ -1.69
PCDH9Q9HC56 AL160275.2-201ENST00000412010 394 ntBASIC4.48□□□□□ -1.69
PCDH9Q9HC56 TMSB10P2-201ENST00000416049 131 ntBASIC4.48□□□□□ -1.69
PCDH9Q9HC56 AL513175.2-201ENST00000422071 443 ntBASIC4.48□□□□□ -1.69
PCDH9Q9HC56 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms