Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AL031985.3-201ENST00000565390 2449 ntBASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 AC016397.1-201ENST00000412463 242 ntBASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 RPL7P53-201ENST00000421245 739 ntBASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 HIGD1AP4-201ENST00000430194 280 ntBASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 PPIAP3-201ENST00000450588 505 ntBASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 RPL21P71-201ENST00000465598 459 ntBASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 RFPL1S-203ENST00000539579 330 ntBASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 AC091516.1-201ENST00000549191 703 ntBASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 CBX3P5-201ENST00000552017 521 ntBASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 MTATP6P25-201ENST00000574491 261 ntBASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 MIR4700-201ENST00000578311 74 ntBASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 VN1R79P-201ENST00000593540 513 ntBASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 MIR6868-201ENST00000611215 58 ntBASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 AC004943.3-201ENST00000624116 600 ntBASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 OR52H1-202ENST00000641796 1061 ntBASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.05□□□□□ -1.76
LRRC40Q9H9A6 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 SNORA70E-201ENST00000384492 135 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 VTA1P1-201ENST00000414044 866 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 XKRYP4-201ENST00000414395 483 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 AC016769.2-201ENST00000414815 475 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 RPL7P28-201ENST00000437739 740 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 HMGB1P37-201ENST00000439613 609 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 AC092685.1-201ENST00000447960 1243 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 MTND2P25-201ENST00000449028 610 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 XKRYP5-201ENST00000449659 483 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 RPL5P32-201ENST00000454085 879 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 HMGB3P30-201ENST00000457863 606 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 AP000873.1-201ENST00000463987 400 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 AL132838.2-201ENST00000492041 314 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 AL035404.1-201ENST00000497982 568 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 AC026726.1-201ENST00000512859 601 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 RN7SKP283-201ENST00000517197 270 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 MRPL49P2-201ENST00000521066 465 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 AC138701.1-201ENST00000524329 714 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 MIR3939-201ENST00000582614 106 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 AC020914.4-201ENST00000597690 277 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 AL445423.1-201ENST00000609941 536 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 MLECP1-201ENST00000615893 709 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 AL139089.1-201ENST00000620372 975 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 AC006065.5-201ENST00000623427 349 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 AC027287.1-201ENST00000553115 1453 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 UBE3AP2-201ENST00000429033 2259 ntBASIC4.04□□□□□ -1.76
LRRC40Q9H9A6 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRRC40Q9H9A6 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRRC40Q9H9A6 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRRC40Q9H9A6 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.03□□□□□ -1.76
LRRC40Q9H9A6 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRRC40Q9H9A6 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRRC40Q9H9A6 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.03□□□□□ -1.76
LRRC40Q9H9A6 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms