Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RSL24D1P3-201ENST00000449255 495 ntBASIC5.4□□□□□ -1.54
SCAPERQ9BY12 AC010655.1-201ENST00000449336 292 ntBASIC5.4□□□□□ -1.54
SCAPERQ9BY12 FTH1P24-201ENST00000503502 462 ntBASIC5.4□□□□□ -1.54
SCAPERQ9BY12 RN7SKP83-201ENST00000516512 178 ntBASIC5.4□□□□□ -1.54
SCAPERQ9BY12 IGHV3-63-201ENST00000518422 341 ntBASIC5.4□□□□□ -1.54
SCAPERQ9BY12 AL390816.3-201ENST00000604527 1066 ntBASIC5.4□□□□□ -1.54
SCAPERQ9BY12 AC241377.1-201ENST00000619797 406 ntBASIC5.4□□□□□ -1.54
SCAPERQ9BY12 MIR4727-201ENST00000622232 55 ntBASIC5.4□□□□□ -1.54
SCAPERQ9BY12 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.4□□□□□ -1.54
SCAPERQ9BY12 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SCAPERQ9BY12 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SCAPERQ9BY12 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SCAPERQ9BY12 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SCAPERQ9BY12 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
SCAPERQ9BY12 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SCAPERQ9BY12 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SCAPERQ9BY12 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.4□□□□□ -1.55
SCAPERQ9BY12 AL691447.1-201ENST00000419456 387 ntBASIC5.4□□□□□ -1.55
SCAPERQ9BY12 USP9YP36-201ENST00000424581 829 ntBASIC5.4□□□□□ -1.55
SCAPERQ9BY12 USP9YP31-201ENST00000431405 881 ntBASIC5.4□□□□□ -1.55
SCAPERQ9BY12 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC5.4□□□□□ -1.55
SCAPERQ9BY12 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.4□□□□□ -1.55
SCAPERQ9BY12 AL121877.1-201ENST00000453704 622 ntBASIC5.4□□□□□ -1.55
SCAPERQ9BY12 S100A11P2-201ENST00000467589 312 ntBASIC5.4□□□□□ -1.55
SCAPERQ9BY12 RPL21P13-201ENST00000488305 481 ntBASIC5.4□□□□□ -1.55
SCAPERQ9BY12 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SCAPERQ9BY12 AC139783.2-201ENST00000504847 1145 ntBASIC5.4□□□□□ -1.55
SCAPERQ9BY12 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.4□□□□□ -1.55
SCAPERQ9BY12 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.4□□□□□ -1.55
SCAPERQ9BY12 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.4□□□□□ -1.55
SCAPERQ9BY12 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.4□□□□□ -1.55
SCAPERQ9BY12 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.4□□□□□ -1.55
SCAPERQ9BY12 AC010680.3-201ENST00000604215 520 ntBASIC5.4□□□□□ -1.55
SCAPERQ9BY12 AC128687.2-201ENST00000609657 566 ntBASIC5.4□□□□□ -1.55
SCAPERQ9BY12 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCAPERQ9BY12 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC5.39□□□□□ -1.55
SCAPERQ9BY12 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCAPERQ9BY12 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.39□□□□□ -1.55
SCAPERQ9BY12 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SCAPERQ9BY12 OR10J6P-201ENST00000289731 930 ntBASIC5.39□□□□□ -1.55
SCAPERQ9BY12 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.39□□□□□ -1.55
SCAPERQ9BY12 AC017079.2-201ENST00000416102 485 ntBASIC5.39□□□□□ -1.55
SCAPERQ9BY12 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.39□□□□□ -1.55
SCAPERQ9BY12 RNF19BPX-201ENST00000426224 625 ntBASIC5.39□□□□□ -1.55
SCAPERQ9BY12 AP001992.1-205ENST00000462248 379 ntBASIC5.39□□□□□ -1.55
SCAPERQ9BY12 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.39□□□□□ -1.55
SCAPERQ9BY12 TMED11P-201ENST00000479478 690 ntBASIC5.39□□□□□ -1.55
SCAPERQ9BY12 RPS26P15-201ENST00000488067 348 ntBASIC5.39□□□□□ -1.55
SCAPERQ9BY12 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.39□□□□□ -1.55
SCAPERQ9BY12 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.39□□□□□ -1.55
SCAPERQ9BY12 UBE2NP1-201ENST00000545592 458 ntBASIC5.39□□□□□ -1.55
SCAPERQ9BY12 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.39□□□□□ -1.55
SCAPERQ9BY12 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SCAPERQ9BY12 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.39□□□□□ -1.55
SCAPERQ9BY12 AL163642.2-201ENST00000604722 1019 ntBASIC5.39□□□□□ -1.55
SCAPERQ9BY12 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.38□□□□□ -1.55
SCAPERQ9BY12 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC5.38□□□□□ -1.55
SCAPERQ9BY12 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SCAPERQ9BY12 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCAPERQ9BY12 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SCAPERQ9BY12 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCAPERQ9BY12 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCAPERQ9BY12 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SCAPERQ9BY12 TAF9BP1-201ENST00000396646 746 ntBASIC5.38□□□□□ -1.55
SCAPERQ9BY12 AL031121.1-201ENST00000406553 254 ntBASIC5.38□□□□□ -1.55
SCAPERQ9BY12 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.38□□□□□ -1.55
SCAPERQ9BY12 SDCBPP2-201ENST00000424643 885 ntBASIC5.38□□□□□ -1.55
SCAPERQ9BY12 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.38□□□□□ -1.55
SCAPERQ9BY12 HIGD1AP12-201ENST00000427832 281 ntBASIC5.38□□□□□ -1.55
SCAPERQ9BY12 RPSAP41-201ENST00000439695 860 ntBASIC5.38□□□□□ -1.55
SCAPERQ9BY12 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.38□□□□□ -1.55
SCAPERQ9BY12 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.38□□□□□ -1.55
SCAPERQ9BY12 IGKV2-26-201ENST00000518305 343 ntBASIC5.38□□□□□ -1.55
SCAPERQ9BY12 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.38□□□□□ -1.55
SCAPERQ9BY12 LARP7P3-201ENST00000579888 337 ntBASIC5.38□□□□□ -1.55
SCAPERQ9BY12 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.38□□□□□ -1.55
SCAPERQ9BY12 MTCO3P22-201ENST00000603219 784 ntBASIC5.38□□□□□ -1.55
SCAPERQ9BY12 AC012603.1-201ENST00000606424 528 ntBASIC5.38□□□□□ -1.55
SCAPERQ9BY12 AC006386.2-201ENST00000624491 75 ntBASIC5.38□□□□□ -1.55
SCAPERQ9BY12 AC012005.1-201ENST00000624575 75 ntBASIC5.38□□□□□ -1.55
SCAPERQ9BY12 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SCAPERQ9BY12 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SCAPERQ9BY12 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
SCAPERQ9BY12 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
SCAPERQ9BY12 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SCAPERQ9BY12 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.37□□□□□ -1.55
SCAPERQ9BY12 AC096576.1-201ENST00000489014 359 ntBASIC5.37□□□□□ -1.55
SCAPERQ9BY12 AC023141.12-201ENST00000512399 199 ntBASIC5.37□□□□□ -1.55
SCAPERQ9BY12 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.37□□□□□ -1.55
SCAPERQ9BY12 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.37□□□□□ -1.55
SCAPERQ9BY12 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SCAPERQ9BY12 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SCAPERQ9BY12 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SCAPERQ9BY12 AC118273.1-201ENST00000525324 3006 ntBASIC5.36□□□□□ -1.55
SCAPERQ9BY12 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SCAPERQ9BY12 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
SCAPERQ9BY12 RNA5SP306-201ENST00000411087 107 ntBASIC5.36□□□□□ -1.55
SCAPERQ9BY12 HMGB3P20-201ENST00000417997 600 ntBASIC5.36□□□□□ -1.55
SCAPERQ9BY12 FTLP19-201ENST00000433300 394 ntBASIC5.36□□□□□ -1.55
SCAPERQ9BY12 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms