Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 OR6R2P-201ENST00000609216 300 ntBASIC4.44□□□□□ -1.7
PKP4Q99569 AC123767.1-202ENST00000620407 817 ntBASIC4.44□□□□□ -1.7
PKP4Q99569 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.44□□□□□ -1.7
PKP4Q99569 AC017037.3-201ENST00000625016 472 ntBASIC4.44□□□□□ -1.7
PKP4Q99569 MIR3974-201ENST00000637126 96 ntBASIC4.44□□□□□ -1.7
PKP4Q99569 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.44□□□□□ -1.7
PKP4Q99569 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PKP4Q99569 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PKP4Q99569 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PKP4Q99569 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PKP4Q99569 PNPT1P2-201ENST00000456768 2050 ntBASIC4.44□□□□□ -1.7
PKP4Q99569 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PKP4Q99569 ZNF849P-201ENST00000594711 1566 ntBASIC4.44□□□□□ -1.7
PKP4Q99569 AL133412.1-201ENST00000380194 2992 ntBASIC4.44□□□□□ -1.7
PKP4Q99569 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
PKP4Q99569 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PKP4Q99569 AC100871.1-201ENST00000507871 1456 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PKP4Q99569 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PKP4Q99569 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PKP4Q99569 AC079741.1-201ENST00000321498 212 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 OR5H2-201ENST00000355273 945 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PKP4Q99569 SNORD113.2-201ENST00000364166 89 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 MIR659-201ENST00000384963 97 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 SNORD96B-201ENST00000386148 79 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 AL136310.1-201ENST00000404926 654 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.43□□□□□ -1.7
PKP4Q99569 AC023128.2-201ENST00000420880 1223 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PKP4Q99569 RPL21P91-201ENST00000429231 479 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PKP4Q99569 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.43□□□□□ -1.7
PKP4Q99569 AC005189.1-201ENST00000431286 310 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 MTND4P32-201ENST00000437189 1237 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.43□□□□□ -1.7
PKP4Q99569 RPL23AP93-201ENST00000440847 484 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 RPS7P5-201ENST00000441482 581 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.43□□□□□ -1.7
PKP4Q99569 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PKP4Q99569 AL513533.1-201ENST00000453728 415 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.43□□□□□ -1.7
PKP4Q99569 TRBV8-2-201ENST00000475637 270 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PKP4Q99569 AL035404.1-201ENST00000497982 568 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 PRELID3BP7-201ENST00000503606 469 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.43□□□□□ -1.7
PKP4Q99569 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.43□□□□□ -1.7
PKP4Q99569 RNA5SP446-201ENST00000515955 82 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 CDH12P4-201ENST00000517835 295 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 CDH12P3-201ENST00000517935 295 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 CDH12P1-201ENST00000518435 295 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.43□□□□□ -1.7
PKP4Q99569 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.43□□□□□ -1.7
PKP4Q99569 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.43□□□□□ -1.7
PKP4Q99569 AL356057.1-201ENST00000533798 831 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PKP4Q99569 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.43□□□□□ -1.7
PKP4Q99569 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.43□□□□□ -1.7
PKP4Q99569 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.43□□□□□ -1.7
PKP4Q99569 MIR4700-201ENST00000578311 74 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 MIR4458-201ENST00000578872 75 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.43□□□□□ -1.7
PKP4Q99569 AC091178.1-203ENST00000584586 279 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 AC012254.4-201ENST00000588843 273 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.43□□□□□ -1.7
PKP4Q99569 AP002906.1-201ENST00000603405 233 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
PKP4Q99569 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.43□□□□□ -1.7
PKP4Q99569 AL158196.1-201ENST00000616786 434 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 STMN1P1-201ENST00000617809 440 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 MIR7703-201ENST00000620784 77 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PKP4Q99569 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.43□□□□□ -1.7
PKP4Q99569 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.43□□□□□ -1.7
PKP4Q99569 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PKP4Q99569 U6.107-201ENST00000637108 79 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PKP4Q99569 AC139713.2-210ENST00000641741 992 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PKP4Q99569 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PKP4Q99569 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PKP4Q99569 AC125257.1-201ENST00000560400 2930 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PKP4Q99569 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PKP4Q99569 ZNF876P-202ENST00000398732 1485 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PKP4Q99569 AC092435.4-201ENST00000623012 4159 ntBASIC4.43□□□□□ -1.7
PKP4Q99569 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.42□□□□□ -1.7
PKP4Q99569 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
PKP4Q99569 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.42□□□□□ -1.7
PKP4Q99569 AL445523.1-201ENST00000451184 1362 ntBASIC4.42□□□□□ -1.7
PKP4Q99569 SCN1A-220ENST00000641603 12506 ntBASIC4.42□□□□□ -1.7
PKP4Q99569 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.42□□□□□ -1.7
PKP4Q99569 OR52E6-202ENST00000379946 954 ntBASIC4.42□□□□□ -1.7
PKP4Q99569 SNORD116-12-201ENST00000384468 92 ntBASIC4.42□□□□□ -1.7
PKP4Q99569 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.42□□□□□ -1.7
PKP4Q99569 RNU6-1242P-201ENST00000391052 103 ntBASIC4.42□□□□□ -1.7
PKP4Q99569 HMGB3P31-201ENST00000413333 595 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms