Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CDK5RAP2Q96SN8 AP001002.2-201ENST00000625137 386 ntBASIC4.16□□□□□ -1.74
CDK5RAP2Q96SN8 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CDK5RAP2Q96SN8 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDK5RAP2Q96SN8 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.16□□□□□ -1.74
CDK5RAP2Q96SN8 AC009229.4-201ENST00000623854 1947 ntBASIC4.16□□□□□ -1.74
CDK5RAP2Q96SN8 AC063923.1-201ENST00000478982 1619 ntBASIC4.16□□□□□ -1.74
CDK5RAP2Q96SN8 GCNT6-201ENST00000379591 934 ntBASIC4.15□□□□□ -1.74
CDK5RAP2Q96SN8 SNORA68.2-201ENST00000391263 128 ntBASIC4.15□□□□□ -1.74
CDK5RAP2Q96SN8 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.15□□□□□ -1.74
CDK5RAP2Q96SN8 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.15□□□□□ -1.74
CDK5RAP2Q96SN8 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.15□□□□□ -1.74
CDK5RAP2Q96SN8 BTF3P5-201ENST00000457252 467 ntBASIC4.15□□□□□ -1.74
CDK5RAP2Q96SN8 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.15□□□□□ -1.74
CDK5RAP2Q96SN8 HMGB3P13-201ENST00000511263 607 ntBASIC4.15□□□□□ -1.74
CDK5RAP2Q96SN8 AC010285.3-201ENST00000511668 676 ntBASIC4.15□□□□□ -1.74
CDK5RAP2Q96SN8 AC103843.2-201ENST00000530523 682 ntBASIC4.15□□□□□ -1.74
CDK5RAP2Q96SN8 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.15□□□□□ -1.74
CDK5RAP2Q96SN8 MIR4276-201ENST00000584832 70 ntBASIC4.15□□□□□ -1.74
CDK5RAP2Q96SN8 AP003355.3-201ENST00000623465 114 ntBASIC4.15□□□□□ -1.74
CDK5RAP2Q96SN8 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CDK5RAP2Q96SN8 DDX6P1-205ENST00000441966 1436 ntBASIC4.15□□□□□ -1.75
CDK5RAP2Q96SN8 RNU1-18P-201ENST00000363062 164 ntBASIC4.15□□□□□ -1.75
CDK5RAP2Q96SN8 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDK5RAP2Q96SN8 RNA5SP229-201ENST00000410809 99 ntBASIC4.15□□□□□ -1.75
CDK5RAP2Q96SN8 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.15□□□□□ -1.75
CDK5RAP2Q96SN8 AC099563.1-201ENST00000456086 418 ntBASIC4.15□□□□□ -1.75
CDK5RAP2Q96SN8 AC109925.1-201ENST00000478069 331 ntBASIC4.15□□□□□ -1.75
CDK5RAP2Q96SN8 AC010342.1-201ENST00000514047 877 ntBASIC4.15□□□□□ -1.75
CDK5RAP2Q96SN8 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.15□□□□□ -1.75
CDK5RAP2Q96SN8 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.15□□□□□ -1.75
CDK5RAP2Q96SN8 AL163642.2-201ENST00000604722 1019 ntBASIC4.15□□□□□ -1.75
CDK5RAP2Q96SN8 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.15□□□□□ -1.75
CDK5RAP2Q96SN8 AC006946.3-201ENST00000609791 756 ntBASIC4.15□□□□□ -1.75
CDK5RAP2Q96SN8 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CDK5RAP2Q96SN8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDK5RAP2Q96SN8 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CDK5RAP2Q96SN8 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDK5RAP2Q96SN8 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CDK5RAP2Q96SN8 AC073073.2-201ENST00000609827 2578 ntBASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 RNVU1-14-201ENST00000384770 164 ntBASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 AL034403.1-201ENST00000399414 885 ntBASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 RSL24D1P1-201ENST00000404972 493 ntBASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 AL356535.1-201ENST00000440335 398 ntBASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 RPS15AP29-201ENST00000445539 400 ntBASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 AC005798.1-201ENST00000513715 387 ntBASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 HMGB1P50-201ENST00000605814 607 ntBASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 AC138932.5-201ENST00000617759 563 ntBASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 AC018555.1-201ENST00000567548 1980 ntBASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDK5RAP2Q96SN8 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 AL357075.1-201ENST00000404107 726 ntBASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 RPL21P13-201ENST00000488305 481 ntBASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 AC006445.1-201ENST00000491925 405 ntBASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 GTF2IP8-201ENST00000560687 584 ntBASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 AC027281.1-201ENST00000574178 758 ntBASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 CKS1BP3-201ENST00000600888 237 ntBASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 ZNF833P-201ENST00000424938 1494 ntBASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 RNA5SP322-201ENST00000363617 119 ntBASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 MIR708-201ENST00000390708 88 ntBASIC4.13□□□□□ -1.75
CDK5RAP2Q96SN8 AC004552.1-201ENST00000419089 348 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms