Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC133644.2-201ENST00000608142 540 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 AC126915.2-201ENST00000610957 190 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 MIR3662-201ENST00000637030 95 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 ABBA01000935.2-201ENST00000637477 838 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 MKKS-204ENST00000639674 192 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 CCT8P1-201ENST00000413611 1657 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 PWAR1-201ENST00000624188 2414 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 ZNF37BP-203ENST00000452306 1352 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 AL355834.1-201ENST00000556602 3965 ntBASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 Y_RNA.162-201ENST00000363683 102 ntBASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 RNU6-692P-201ENST00000384496 107 ntBASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 U8.14-201ENST00000390843 143 ntBASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 RPS24P12-201ENST00000402084 394 ntBASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 NPM1P38-201ENST00000403835 865 ntBASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 SDCBPP3-201ENST00000419629 891 ntBASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 ATP5HP2-201ENST00000433885 485 ntBASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 MTND4P19-201ENST00000446659 478 ntBASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 MEMO1P4-201ENST00000453590 386 ntBASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 BX322784.1-201ENST00000455793 1077 ntBASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 RBM43P1-201ENST00000476891 1081 ntBASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 MTND5P5-201ENST00000503764 376 ntBASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 AC138832.1-201ENST00000522871 556 ntBASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 ARL2BPP5-201ENST00000523141 481 ntBASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 MIR5697-201ENST00000578045 78 ntBASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 CYP1D1P-201ENST00000416662 1433 ntBASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 AL355488.2-201ENST00000609909 2850 ntBASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
SYNGAP1Q96PV0 AC012618.3-205ENST00000637896 1496 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 U3.2-201ENST00000362981 210 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 RNY4P34-201ENST00000364779 95 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 OR52E6-202ENST00000379946 954 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 Y_RNA.529-201ENST00000384586 119 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 SNORA11.2-201ENST00000408318 127 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 RPS3AP3-201ENST00000411933 242 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 B3GALNT1P1-201ENST00000420569 975 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 AC108075.1-201ENST00000424692 529 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 AL513185.2-201ENST00000425543 193 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 PRUNEP1-201ENST00000425846 705 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 C4BPAP2-201ENST00000428434 478 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 AC105399.1-202ENST00000447303 205 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 RPS23P9-201ENST00000448848 438 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 RN7SL481P-201ENST00000477764 299 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 AC091544.1-201ENST00000484702 348 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms