Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 RNA5SP179-201ENST00000517284 121 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 IGKV2D-23-201ENST00000518179 286 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 UBTFL9-201ENST00000534504 1148 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AC022968.1-201ENST00000567372 442 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AC053481.4-201ENST00000583164 216 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AC091167.4-201ENST00000605079 184 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AL592436.1-201ENST00000605135 558 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AC010680.4-201ENST00000605334 543 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AC124312.6-202ENST00000623624 418 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AL773545.4-201ENST00000637262 310 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AL513478.4-201ENST00000641636 310 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AC138393.1-206ENST00000540997 1886 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AC006042.3-201ENST00000454684 1469 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 EXOC5P1-201ENST00000510543 1969 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 FAM91A3P-201ENST00000456826 2544 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.1□□□□□ -1.75
RPRD1AQ96P16 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RPRD1AQ96P16 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RPRD1AQ96P16 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RPRD1AQ96P16 RNA5SP399-201ENST00000364003 117 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.1□□□□□ -1.75
RPRD1AQ96P16 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.1□□□□□ -1.75
RPRD1AQ96P16 RNU6-317P-201ENST00000384031 107 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 AL589655.1-201ENST00000405398 482 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 RNU4-74P-201ENST00000411280 161 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 MTND2P11-201ENST00000423638 648 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 VDAC1P6-201ENST00000430062 855 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.1□□□□□ -1.75
RPRD1AQ96P16 VN1R25P-201ENST00000443385 738 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 MTND2P8-201ENST00000450555 1025 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 VN1R40P-201ENST00000455196 941 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.1□□□□□ -1.75
RPRD1AQ96P16 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RPRD1AQ96P16 SYT14P1-201ENST00000481459 721 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.1□□□□□ -1.75
RPRD1AQ96P16 VN1R105P-201ENST00000486595 910 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 AC025459.1-201ENST00000504072 156 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 HNRNPKP5-201ENST00000515300 253 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.1□□□□□ -1.75
RPRD1AQ96P16 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.1□□□□□ -1.75
RPRD1AQ96P16 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.1□□□□□ -1.75
RPRD1AQ96P16 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.1□□□□□ -1.75
RPRD1AQ96P16 AC244505.7-201ENST00000599675 272 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 AL020997.2-201ENST00000602607 184 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 AL355816.1-201ENST00000607951 118 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 CR589904.2-201ENST00000612533 440 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 AL139089.1-201ENST00000620372 975 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 AC104820.1-201ENST00000624183 307 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.1□□□□□ -1.75
RPRD1AQ96P16 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.1□□□□□ -1.75
RPRD1AQ96P16 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
RPRD1AQ96P16 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.1□□□□□ -1.75
RPRD1AQ96P16 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RPRD1AQ96P16 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RPRD1AQ96P16 DDX6P1-205ENST00000441966 1436 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 AP002001.2-201ENST00000529025 1469 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 AL353743.4-201ENST00000422653 1547 ntBASIC4.1□□□□□ -1.75
RPRD1AQ96P16 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RPRD1AQ96P16 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 U3.15-201ENST00000365398 212 ntBASIC4.09□□□□□ -1.75
RPRD1AQ96P16 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 SNORA3C-201ENST00000408792 125 ntBASIC4.09□□□□□ -1.75
RPRD1AQ96P16 RPL7AP73-201ENST00000413490 353 ntBASIC4.09□□□□□ -1.75
RPRD1AQ96P16 RPL7P2-201ENST00000427639 268 ntBASIC4.09□□□□□ -1.75
RPRD1AQ96P16 AL590623.1-201ENST00000427864 105 ntBASIC4.09□□□□□ -1.75
RPRD1AQ96P16 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 MTND2P21-201ENST00000436242 1042 ntBASIC4.09□□□□□ -1.75
RPRD1AQ96P16 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 MED6P1-201ENST00000439659 713 ntBASIC4.09□□□□□ -1.75
RPRD1AQ96P16 AC114878.1-201ENST00000441166 358 ntBASIC4.09□□□□□ -1.75
RPRD1AQ96P16 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 PPIAP15-201ENST00000479662 484 ntBASIC4.09□□□□□ -1.75
RPRD1AQ96P16 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 AC026402.1-201ENST00000513642 170 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms