Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 ELOCP8-201ENST00000439309 332 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 ELOCP15-201ENST00000442090 332 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 AL591503.2-201ENST00000442314 1005 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS50Q96JG6 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS50Q96JG6 RPL12P26-201ENST00000452430 487 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS50Q96JG6 AC093270.2-201ENST00000486157 792 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 OR2A20P-203ENST00000498397 1268 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 XKRY-201ENST00000510392 1100 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 AC008494.2-201ENST00000514544 370 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 RNU6-1225P-201ENST00000516336 65 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 RN7SKP31-201ENST00000516354 278 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 RNU6-885P-201ENST00000516607 104 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 AC105185.1-201ENST00000518705 535 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS50Q96JG6 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.86□□□□□ -1.63
VPS50Q96JG6 COX6B1P6-201ENST00000522347 255 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS50Q96JG6 NMNAT1P1-201ENST00000554095 876 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 GTF2IP8-201ENST00000560687 584 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS50Q96JG6 AC115085.1-201ENST00000588924 229 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS50Q96JG6 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS50Q96JG6 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS50Q96JG6 AC105129.3-201ENST00000605455 485 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS50Q96JG6 AC093799.2-201ENST00000610062 578 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 AC122133.1-201ENST00000613964 233 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS50Q96JG6 AC069209.1-201ENST00000619282 651 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 BMS1P21-201ENST00000634565 365 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS50Q96JG6 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 CYP1D1P-201ENST00000416662 1433 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS50Q96JG6 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS50Q96JG6 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VPS50Q96JG6 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS50Q96JG6 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 AC107068.1-201ENST00000563286 4218 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 AL391994.1-201ENST00000254724 282 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS50Q96JG6 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS50Q96JG6 Y_RNA.436-201ENST00000384097 102 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 TAF9BP1-201ENST00000396646 746 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 U3.32-201ENST00000408116 212 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 RAB11AP1-201ENST00000442978 646 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 HIGD1AP8-201ENST00000453927 274 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 RPL5P30-201ENST00000465511 891 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 SYPL1P1-201ENST00000473622 768 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 RN7SL808P-201ENST00000496066 299 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 AC109445.1-201ENST00000512356 383 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 AC008562.1-201ENST00000521763 330 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS50Q96JG6 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 UBE2NP1-201ENST00000545592 458 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 AC090515.3-201ENST00000560431 315 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS50Q96JG6 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 VN1R82P-201ENST00000601481 356 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 RPL26P30-202ENST00000602923 645 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 AC103881.1-201ENST00000603476 538 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 AC004948.1-201ENST00000609858 672 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 uc_338.18-201ENST00000615451 175 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 AC092140.2-201ENST00000618027 521 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 AC073348.1-201ENST00000623002 331 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 AC007494.3-201ENST00000624660 743 ntBASIC4.85□□□□□ -1.63
VPS50Q96JG6 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS50Q96JG6 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS50Q96JG6 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms