Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.22□□□□□ -1.73
PDLIM5Q96HC4 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
PDLIM5Q96HC4 AC104115.2-201ENST00000523026 687 ntBASIC4.22□□□□□ -1.73
PDLIM5Q96HC4 OR5M7P-201ENST00000526140 972 ntBASIC4.22□□□□□ -1.73
PDLIM5Q96HC4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.22□□□□□ -1.73
PDLIM5Q96HC4 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM5Q96HC4 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.22□□□□□ -1.73
PDLIM5Q96HC4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM5Q96HC4 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
PDLIM5Q96HC4 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM5Q96HC4 AC005255.1-201ENST00000593748 216 ntBASIC4.22□□□□□ -1.73
PDLIM5Q96HC4 AL354984.3-201ENST00000604803 325 ntBASIC4.22□□□□□ -1.73
PDLIM5Q96HC4 AC090948.1-201ENST00000607464 549 ntBASIC4.22□□□□□ -1.73
PDLIM5Q96HC4 AC104763.3-201ENST00000613765 618 ntBASIC4.22□□□□□ -1.73
PDLIM5Q96HC4 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
PDLIM5Q96HC4 AP000943.4-201ENST00000622912 357 ntBASIC4.22□□□□□ -1.73
PDLIM5Q96HC4 AC140479.6-201ENST00000633535 357 ntBASIC4.22□□□□□ -1.73
PDLIM5Q96HC4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.22□□□□□ -1.73
PDLIM5Q96HC4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM5Q96HC4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.22□□□□□ -1.73
PDLIM5Q96HC4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM5Q96HC4 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.21□□□□□ -1.73
PDLIM5Q96HC4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PDLIM5Q96HC4 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.21□□□□□ -1.73
PDLIM5Q96HC4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AC103591.2-201ENST00000265259 766 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 RNA5SP505-201ENST00000364748 108 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 RNU6-398P-201ENST00000384143 109 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 MIR192-201ENST00000384915 110 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 RSL24D1P1-201ENST00000404972 493 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AC241520.1-201ENST00000422654 1099 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 OR4F13P-201ENST00000428478 931 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AC011998.1-201ENST00000433403 117 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AL353748.1-201ENST00000440753 474 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 RNF2P1-201ENST00000442955 1010 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AL929288.2-201ENST00000446368 407 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 HMGB3P30-201ENST00000457863 606 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AC025445.1-201ENST00000502728 300 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 PPM1AP1-201ENST00000502740 1135 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AL592156.1-201ENST00000508758 304 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AC068831.4-201ENST00000556118 109 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AC023824.3-201ENST00000569003 562 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 MIR4504-201ENST00000577413 92 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AC006116.7-201ENST00000590141 756 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AC121761.2-201ENST00000617300 689 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AC023510.2-201ENST00000622162 746 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 C2orf27A-204ENST00000623058 969 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AC068880.4-201ENST00000623082 495 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AC006065.5-201ENST00000623427 349 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 MTND5P3-201ENST00000438536 1800 ntBASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM5Q96HC4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
PDLIM5Q96HC4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDLIM5Q96HC4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PDLIM5Q96HC4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PDLIM5Q96HC4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.2□□□□□ -1.74
PDLIM5Q96HC4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDLIM5Q96HC4 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.2□□□□□ -1.74
PDLIM5Q96HC4 AC025263.3-201ENST00000622965 1396 ntBASIC4.2□□□□□ -1.74
PDLIM5Q96HC4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
PDLIM5Q96HC4 RNU6-1151P-201ENST00000384684 107 ntBASIC4.2□□□□□ -1.74
PDLIM5Q96HC4 RNA5SP332-201ENST00000391063 115 ntBASIC4.2□□□□□ -1.74
PDLIM5Q96HC4 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDLIM5Q96HC4 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.2□□□□□ -1.74
PDLIM5Q96HC4 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDLIM5Q96HC4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.2□□□□□ -1.74
PDLIM5Q96HC4 RNA5SP104-201ENST00000410989 118 ntBASIC4.2□□□□□ -1.74
PDLIM5Q96HC4 ELOCP19-201ENST00000411919 318 ntBASIC4.2□□□□□ -1.74
PDLIM5Q96HC4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms