Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 OR5M14P-201ENST00000506803 618 ntBASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 AC006390.1-201ENST00000508068 283 ntBASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 AC036111.2-201ENST00000533247 901 ntBASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 HMGB1P33-201ENST00000563485 527 ntBASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 AC034268.2-201ENST00000571784 482 ntBASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 LARP7P2-201ENST00000575306 125 ntBASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 MIR4504-201ENST00000577413 92 ntBASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 COX6CP4-201ENST00000605798 228 ntBASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 RNU6-87P-201ENST00000607561 108 ntBASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 AC108673.3-201ENST00000609183 335 ntBASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 AL139099.4-201ENST00000614802 114 ntBASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 AC123768.4-201ENST00000616244 701 ntBASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 RFPL4AP6-201ENST00000616792 846 ntBASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 AL445264.1-201ENST00000621719 171 ntBASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 AC138965.3-201ENST00000623875 498 ntBASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 AC099654.6-201ENST00000636487 512 ntBASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 LRRC77P-213ENST00000637727 880 ntBASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 RBPJP7-201ENST00000442803 1447 ntBASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 RBPJP5-201ENST00000449433 1447 ntBASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXRED1Q96CU9 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 BRAFP1-201ENST00000445336 2703 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 AC012254.3-201ENST00000591183 2117 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 AC133552.1-201ENST00000569988 4007 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 MFSD8-239ENST00000641590 2479 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 AP000756.2-201ENST00000624168 2567 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 OR4K15-201ENST00000305051 1216 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 RNU1-134P-201ENST00000362935 165 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 RNU6-249P-201ENST00000363016 102 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 U8.3-201ENST00000363321 132 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 AC016769.3-201ENST00000396562 315 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 RNU2-50P-201ENST00000410494 143 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 RNF10P1-201ENST00000418589 369 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 RPL24P2-201ENST00000421023 475 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 AL139413.1-201ENST00000421309 217 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 MTCO2P5-201ENST00000422621 426 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 ELOCP14-201ENST00000428070 331 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 AC073464.1-201ENST00000429823 534 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 RPEP2-201ENST00000432149 701 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 ELOCP7-201ENST00000439968 331 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 CBX1P1-201ENST00000440184 427 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 HSPE1P28-201ENST00000443139 211 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 MED28P3-201ENST00000444288 531 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 AC097463.1-201ENST00000447288 481 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 AP000542.1-201ENST00000448473 371 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 RN7SL170P-201ENST00000487098 295 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 AP001025.2-201ENST00000490908 477 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 AC105384.2-201ENST00000508433 640 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 HSD3BP3-201ENST00000514706 994 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 Y_RNA.672-201ENST00000516289 104 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 Y_RNA.702-201ENST00000516843 96 ntBASIC5.03□□□□□ -1.6
FOXRED1Q96CU9 RNU2-46P-201ENST00000517038 113 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms