Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNED1Q8TER0 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.67□□□□□ -1.66
SNED1Q8TER0 AC092435.4-201ENST00000623012 4159 ntBASIC4.67□□□□□ -1.66
SNED1Q8TER0 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SNED1Q8TER0 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.66□□□□□ -1.66
SNED1Q8TER0 RNA5SP105-201ENST00000391123 113 ntBASIC4.66□□□□□ -1.66
SNED1Q8TER0 RN7SKP97-201ENST00000410966 333 ntBASIC4.66□□□□□ -1.66
SNED1Q8TER0 GSTM3P2-201ENST00000412746 530 ntBASIC4.66□□□□□ -1.66
SNED1Q8TER0 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.66□□□□□ -1.66
SNED1Q8TER0 GNG5P5-201ENST00000420444 220 ntBASIC4.66□□□□□ -1.66
SNED1Q8TER0 CR848007.2-201ENST00000424918 787 ntBASIC4.66□□□□□ -1.66
SNED1Q8TER0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.66□□□□□ -1.66
SNED1Q8TER0 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.66□□□□□ -1.66
SNED1Q8TER0 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.66□□□□□ -1.66
SNED1Q8TER0 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.66□□□□□ -1.66
SNED1Q8TER0 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.66□□□□□ -1.66
SNED1Q8TER0 MTCYBP14-201ENST00000457471 715 ntBASIC4.66□□□□□ -1.66
SNED1Q8TER0 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.66□□□□□ -1.66
SNED1Q8TER0 GTF2IP9-201ENST00000502460 301 ntBASIC4.66□□□□□ -1.66
SNED1Q8TER0 MTND3P24-201ENST00000506306 329 ntBASIC4.66□□□□□ -1.66
SNED1Q8TER0 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.66□□□□□ -1.66
SNED1Q8TER0 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.66□□□□□ -1.66
SNED1Q8TER0 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.66□□□□□ -1.66
SNED1Q8TER0 OR5M7P-201ENST00000526140 972 ntBASIC4.66□□□□□ -1.66
SNED1Q8TER0 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SNED1Q8TER0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.66□□□□□ -1.66
SNED1Q8TER0 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.66□□□□□ -1.66
SNED1Q8TER0 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.66□□□□□ -1.66
SNED1Q8TER0 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.66□□□□□ -1.66
SNED1Q8TER0 LINC00557-201ENST00000563184 1279 ntBASIC4.66□□□□□ -1.66
SNED1Q8TER0 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.66□□□□□ -1.66
SNED1Q8TER0 AC068020.1-201ENST00000594215 661 ntBASIC4.66□□□□□ -1.66
SNED1Q8TER0 AC040174.2-201ENST00000602701 465 ntBASIC4.66□□□□□ -1.66
SNED1Q8TER0 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.66□□□□□ -1.66
SNED1Q8TER0 AL137849.1-201ENST00000604767 169 ntBASIC4.66□□□□□ -1.66
SNED1Q8TER0 AC006946.3-201ENST00000609791 756 ntBASIC4.66□□□□□ -1.66
SNED1Q8TER0 AC068057.2-201ENST00000624047 895 ntBASIC4.66□□□□□ -1.66
SNED1Q8TER0 AP003485.1-201ENST00000625093 753 ntBASIC4.66□□□□□ -1.66
SNED1Q8TER0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNED1Q8TER0 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SNED1Q8TER0 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNED1Q8TER0 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNED1Q8TER0 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SNED1Q8TER0 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNED1Q8TER0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.66□□□□□ -1.66
SNED1Q8TER0 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
SNED1Q8TER0 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
SNED1Q8TER0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SNED1Q8TER0 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.65□□□□□ -1.66
SNED1Q8TER0 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SNED1Q8TER0 SNORA3C-201ENST00000408792 125 ntBASIC4.65□□□□□ -1.66
SNED1Q8TER0 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.65□□□□□ -1.66
SNED1Q8TER0 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.65□□□□□ -1.66
SNED1Q8TER0 OR6C72P-201ENST00000451403 892 ntBASIC4.65□□□□□ -1.66
SNED1Q8TER0 RBMY2UP-201ENST00000453474 324 ntBASIC4.65□□□□□ -1.66
SNED1Q8TER0 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.65□□□□□ -1.66
SNED1Q8TER0 RPL21P11-201ENST00000461458 483 ntBASIC4.65□□□□□ -1.66
SNED1Q8TER0 RPS4XP12-201ENST00000461747 709 ntBASIC4.65□□□□□ -1.66
SNED1Q8TER0 RN7SL601P-201ENST00000471221 293 ntBASIC4.65□□□□□ -1.66
SNED1Q8TER0 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.65□□□□□ -1.66
SNED1Q8TER0 ARL4AP1-201ENST00000503220 705 ntBASIC4.65□□□□□ -1.66
SNED1Q8TER0 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.65□□□□□ -1.66
SNED1Q8TER0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SNED1Q8TER0 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.65□□□□□ -1.66
SNED1Q8TER0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.65□□□□□ -1.66
SNED1Q8TER0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.65□□□□□ -1.66
SNED1Q8TER0 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.65□□□□□ -1.66
SNED1Q8TER0 RPL21P12-201ENST00000559810 515 ntBASIC4.65□□□□□ -1.66
SNED1Q8TER0 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.65□□□□□ -1.66
SNED1Q8TER0 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.65□□□□□ -1.66
SNED1Q8TER0 AC022387.2-201ENST00000604050 448 ntBASIC4.65□□□□□ -1.66
SNED1Q8TER0 AL773545.4-201ENST00000637262 310 ntBASIC4.65□□□□□ -1.66
SNED1Q8TER0 AC244258.1-201ENST00000637553 1071 ntBASIC4.65□□□□□ -1.66
SNED1Q8TER0 AL513478.4-201ENST00000641636 310 ntBASIC4.65□□□□□ -1.66
SNED1Q8TER0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
SNED1Q8TER0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
SNED1Q8TER0 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
SNED1Q8TER0 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.65□□□□□ -1.66
SNED1Q8TER0 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SNED1Q8TER0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SNED1Q8TER0 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
SNED1Q8TER0 ZNF833P-201ENST00000424938 1494 ntBASIC4.65□□□□□ -1.67
SNED1Q8TER0 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SNED1Q8TER0 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SNED1Q8TER0 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SNED1Q8TER0 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SNED1Q8TER0 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.64□□□□□ -1.67
SNED1Q8TER0 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.64□□□□□ -1.67
SNED1Q8TER0 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.64□□□□□ -1.67
SNED1Q8TER0 RPL12P18-201ENST00000437175 325 ntBASIC4.64□□□□□ -1.67
SNED1Q8TER0 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.64□□□□□ -1.67
SNED1Q8TER0 RANP8-201ENST00000444720 713 ntBASIC4.64□□□□□ -1.67
SNED1Q8TER0 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SNED1Q8TER0 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.64□□□□□ -1.67
SNED1Q8TER0 HMGN1P11-201ENST00000508668 303 ntBASIC4.64□□□□□ -1.67
SNED1Q8TER0 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.64□□□□□ -1.67
SNED1Q8TER0 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.64□□□□□ -1.67
SNED1Q8TER0 RAC1P2-201ENST00000511164 579 ntBASIC4.64□□□□□ -1.67
SNED1Q8TER0 AC034244.2-201ENST00000514668 858 ntBASIC4.64□□□□□ -1.67
SNED1Q8TER0 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms