Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC015726.1-201ENST00000602353 681 ntBASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 AF001550.2-201ENST00000636643 217 ntBASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 SPATA2P1-201ENST00000431223 2055 ntBASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 AC100871.1-201ENST00000507871 1456 ntBASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 RNU6-304P-201ENST00000364855 107 ntBASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 RNA5SP283-201ENST00000365604 119 ntBASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 MIR421-201ENST00000365696 85 ntBASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 RNU6-628P-201ENST00000410675 107 ntBASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 RAB28P1-201ENST00000411517 641 ntBASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 AC098824.1-201ENST00000453565 980 ntBASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 RPL5P13-201ENST00000462840 709 ntBASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 AC007224.1-201ENST00000564410 144 ntBASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 AC007423.1-201ENST00000605009 627 ntBASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 AC092653.1-201ENST00000608509 531 ntBASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 AC016911.1-201ENST00000613297 452 ntBASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC65Q8IXS2 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 RNU6-213P-201ENST00000384051 104 ntBASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 MIR7-1-201ENST00000384871 110 ntBASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 ZNF602P-201ENST00000405929 924 ntBASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 AL034374.1-201ENST00000406329 351 ntBASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 AL512504.1-201ENST00000415494 778 ntBASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 Z74696.2-201ENST00000436514 498 ntBASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 CACYBPP1-201ENST00000438592 684 ntBASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 AC092809.1-201ENST00000441469 474 ntBASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 RNU7-170P-201ENST00000459303 61 ntBASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 RPL9P32-201ENST00000464118 620 ntBASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 AC084198.1-201ENST00000477747 402 ntBASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 AC108941.1-201ENST00000502853 530 ntBASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 AC004069.2-201ENST00000505438 1114 ntBASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 AC010460.1-201ENST00000507087 466 ntBASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 RNA5SP164-201ENST00000516533 110 ntBASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 AL133247.2-201ENST00000603236 482 ntBASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 AC073111.2-201ENST00000605657 1075 ntBASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC65Q8IXS2 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 PPIAP31-201ENST00000405422 495 ntBASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 RHEBP3-201ENST00000411920 351 ntBASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 AC092832.1-201ENST00000422934 400 ntBASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 AC004975.1-201ENST00000428733 208 ntBASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 MORF4L1P4-201ENST00000450245 976 ntBASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 CYCSP53-201ENST00000455540 265 ntBASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 OR9M1P-201ENST00000459641 921 ntBASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 TRAV31-201ENST00000502780 342 ntBASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 PCNAP1-201ENST00000505363 709 ntBASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 SUMO2P20-201ENST00000520803 283 ntBASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 AC084373.1-201ENST00000603311 235 ntBASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 AL390816.3-201ENST00000604527 1066 ntBASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 AL137849.1-201ENST00000604767 169 ntBASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 AL034351.1-201ENST00000605288 668 ntBASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 AL354760.1-201ENST00000608357 643 ntBASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms