Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 GTF2IP23-201ENST00000423746 351 ntBASIC4.79□□□□□ -1.64
RFX6Q8HWS3 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 RPL21P110-201ENST00000433345 446 ntBASIC4.79□□□□□ -1.64
RFX6Q8HWS3 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AC016831.4-201ENST00000438302 307 ntBASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AC108463.1-201ENST00000450258 347 ntBASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AC079776.3-201ENST00000450665 370 ntBASIC4.79□□□□□ -1.64
RFX6Q8HWS3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AC108471.1-201ENST00000513977 287 ntBASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AP000676.2-201ENST00000529711 301 ntBASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 ELOCP32-201ENST00000548625 324 ntBASIC4.79□□□□□ -1.64
RFX6Q8HWS3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AC091178.1-203ENST00000584586 279 ntBASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 BNIP3P26-201ENST00000600827 554 ntBASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AC069545.1-201ENST00000605671 358 ntBASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AC008966.2-201ENST00000606157 453 ntBASIC4.79□□□□□ -1.64
RFX6Q8HWS3 MIR6853-201ENST00000619642 74 ntBASIC4.79□□□□□ -1.64
RFX6Q8HWS3 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AL049737.1-201ENST00000413920 1403 ntBASIC4.79□□□□□ -1.64
RFX6Q8HWS3 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 MAPK10-286ENST00000641208 8747 ntBASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFX6Q8HWS3 AC091046.3-201ENST00000631455 1574 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 RNF6P1-201ENST00000444889 1784 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AC131971.1-201ENST00000332881 1482 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AL390862.1-201ENST00000635467 1469 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 MIR195-201ENST00000385194 87 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 RSL24D1P4-201ENST00000400938 484 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AL109941.1-201ENST00000401925 229 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AC011233.1-201ENST00000422812 283 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AL009174.1-201ENST00000426577 416 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 USP9YP31-201ENST00000431405 881 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 YWHAZP7-201ENST00000436906 631 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 RPL23AP76-201ENST00000441860 458 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AC091685.2-201ENST00000454924 864 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AC104763.1-201ENST00000475274 360 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 RPL36AP41-201ENST00000493820 306 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AC116353.3-201ENST00000511215 249 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 HMGB1P23-201ENST00000518743 568 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AL110118.1-201ENST00000553543 400 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 ATP5J2P6-201ENST00000565203 266 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AC090312.2-201ENST00000582687 378 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AC022069.1-201ENST00000582910 658 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 NBR2-204ENST00000587322 63 ntBASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.78□□□□□ -1.64
RFX6Q8HWS3 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms