Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AC006504.6-201ENST00000590142 199 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 Z98200.1-201ENST00000607298 470 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AC105429.2-201ENST00000610567 517 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AL031658.2-201ENST00000616850 651 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AC009248.2-201ENST00000619826 254 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AC079684.1-201ENST00000621405 437 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AL356585.4-201ENST00000623078 1229 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 U6.101-201ENST00000637707 76 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AC100810.6-201ENST00000638068 285 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AC010401.2-201ENST00000575137 4934 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 THAP12P9-201ENST00000503971 2360 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 NUP58P1-201ENST00000502546 1738 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 HSPA8P18-201ENST00000439846 1928 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 TRIM51GP-201ENST00000534741 1350 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 COX6B1P3-201ENST00000312310 260 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AC005294.1-201ENST00000355509 281 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 RNU6-223P-201ENST00000362830 107 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 Y_RNA.138-201ENST00000363462 102 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 GNG5P2-201ENST00000372054 207 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 Y_RNA.384-201ENST00000383909 102 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 SNORA20.2-201ENST00000383922 131 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 MIR137-201ENST00000385223 102 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 MTND3P8-201ENST00000412909 339 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 USP24P1-201ENST00000433802 779 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AMYP1-201ENST00000440059 1023 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 RPL23AP15-201ENST00000450202 459 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AC009963.3-201ENST00000458090 486 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 APOOP2-201ENST00000461561 539 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 RPL37P23-201ENST00000492641 294 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AC103851.1-201ENST00000506833 274 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 RN7SKP288-201ENST00000516227 268 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 SOD1P3-201ENST00000518682 454 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 MIR3167-201ENST00000579623 85 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 MAGOH2P-202ENST00000584384 429 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AC005224.3-201ENST00000584683 2140 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 BBIP1P1-201ENST00000602999 279 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AL133215.3-201ENST00000609801 448 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AC008121.3-201ENST00000618726 433 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AC134503.1-201ENST00000633048 54 ntBASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBE3DQ7Z6J8 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 196.3 ms