Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
RNF44Q7L0R7 PCMTD1P7-201ENST00000634506 357 ntBASIC4.81□□□□□ -1.64
RNF44Q7L0R7 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF44Q7L0R7 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF44Q7L0R7 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF44Q7L0R7 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.81□□□□□ -1.64
RNF44Q7L0R7 INTS6P1-201ENST00000504674 2530 ntBASIC4.81□□□□□ -1.64
RNF44Q7L0R7 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF44Q7L0R7 AC090971.4-201ENST00000560291 1800 ntBASIC4.81□□□□□ -1.64
RNF44Q7L0R7 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
RNF44Q7L0R7 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 RN7SKP95-201ENST00000362860 303 ntBASIC4.8□□□□□ -1.64
RNF44Q7L0R7 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 SNRPEP2-201ENST00000397592 279 ntBASIC4.8□□□□□ -1.64
RNF44Q7L0R7 EI24P3-201ENST00000399046 1062 ntBASIC4.8□□□□□ -1.64
RNF44Q7L0R7 RPL21P67-201ENST00000402896 478 ntBASIC4.8□□□□□ -1.64
RNF44Q7L0R7 RNU6-920P-201ENST00000410926 92 ntBASIC4.8□□□□□ -1.64
RNF44Q7L0R7 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 LINC00993-201ENST00000420453 540 ntBASIC4.8□□□□□ -1.64
RNF44Q7L0R7 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 BX119904.4-201ENST00000424402 301 ntBASIC4.8□□□□□ -1.64
RNF44Q7L0R7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 VN1R54P-201ENST00000435210 1049 ntBASIC4.8□□□□□ -1.64
RNF44Q7L0R7 MTCYBP39-201ENST00000437562 491 ntBASIC4.8□□□□□ -1.64
RNF44Q7L0R7 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 VN1R10P-201ENST00000447106 875 ntBASIC4.8□□□□□ -1.64
RNF44Q7L0R7 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 AC072039.1-201ENST00000477611 581 ntBASIC4.8□□□□□ -1.64
RNF44Q7L0R7 AC005726.1-201ENST00000494679 427 ntBASIC4.8□□□□□ -1.64
RNF44Q7L0R7 AC092045.1-201ENST00000495716 1231 ntBASIC4.8□□□□□ -1.64
RNF44Q7L0R7 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 AC012435.1-202ENST00000568772 240 ntBASIC4.8□□□□□ -1.64
RNF44Q7L0R7 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 AL590229.1-201ENST00000603497 542 ntBASIC4.8□□□□□ -1.64
RNF44Q7L0R7 AC133644.2-201ENST00000608142 540 ntBASIC4.8□□□□□ -1.64
RNF44Q7L0R7 AC024560.3-201ENST00000608482 349 ntBASIC4.8□□□□□ -1.64
RNF44Q7L0R7 AC090510.2-201ENST00000617465 629 ntBASIC4.8□□□□□ -1.64
RNF44Q7L0R7 AC091905.4-201ENST00000623432 202 ntBASIC4.8□□□□□ -1.64
RNF44Q7L0R7 AC091965.5-201ENST00000624785 342 ntBASIC4.8□□□□□ -1.64
RNF44Q7L0R7 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RNF44Q7L0R7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF44Q7L0R7 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF44Q7L0R7 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF44Q7L0R7 MTCO1P14-201ENST00000441695 1559 ntBASIC4.79□□□□□ -1.64
RNF44Q7L0R7 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF44Q7L0R7 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.79□□□□□ -1.64
RNF44Q7L0R7 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF44Q7L0R7 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.79□□□□□ -1.64
RNF44Q7L0R7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF44Q7L0R7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RNF44Q7L0R7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF44Q7L0R7 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF44Q7L0R7 ERCC6-202ENST00000374127 1782 ntBASIC4.79□□□□□ -1.64
RNF44Q7L0R7 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
RNF44Q7L0R7 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF44Q7L0R7 Y_RNA.18-201ENST00000362461 102 ntBASIC4.79□□□□□ -1.64
RNF44Q7L0R7 RNA5SP123-201ENST00000363244 119 ntBASIC4.79□□□□□ -1.64
RNF44Q7L0R7 RNU6-1243P-201ENST00000364028 107 ntBASIC4.79□□□□□ -1.64
RNF44Q7L0R7 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF44Q7L0R7 RN7SKP16-201ENST00000410180 299 ntBASIC4.79□□□□□ -1.64
RNF44Q7L0R7 RN7SKP125-201ENST00000410481 302 ntBASIC4.79□□□□□ -1.64
RNF44Q7L0R7 AL133384.1-201ENST00000412744 351 ntBASIC4.79□□□□□ -1.64
RNF44Q7L0R7 RPS15AP38-201ENST00000413110 372 ntBASIC4.79□□□□□ -1.64
RNF44Q7L0R7 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF44Q7L0R7 NUP35P2-201ENST00000416748 943 ntBASIC4.79□□□□□ -1.64
RNF44Q7L0R7 AC016907.1-201ENST00000419483 435 ntBASIC4.79□□□□□ -1.64
RNF44Q7L0R7 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF44Q7L0R7 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.79□□□□□ -1.64
RNF44Q7L0R7 RPL23AP16-201ENST00000441715 421 ntBASIC4.79□□□□□ -1.64
RNF44Q7L0R7 CEACAMP9-201ENST00000442990 513 ntBASIC4.79□□□□□ -1.64
RNF44Q7L0R7 AL137845.2-201ENST00000444292 988 ntBASIC4.79□□□□□ -1.64
RNF44Q7L0R7 PTMAP3-201ENST00000447474 330 ntBASIC4.79□□□□□ -1.64
RNF44Q7L0R7 RPL31P3-201ENST00000458430 332 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms