Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
VPS13CQ709C8 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13CQ709C8 SNORA54-201ENST00000384281 123 ntBASIC2.77□□□□□ -1.97
VPS13CQ709C8 AC003685.2-201ENST00000422795 395 ntBASIC2.77□□□□□ -1.97
VPS13CQ709C8 AL139132.1-201ENST00000431587 344 ntBASIC2.77□□□□□ -1.97
VPS13CQ709C8 HMGN2P7-201ENST00000456186 273 ntBASIC2.77□□□□□ -1.97
VPS13CQ709C8 PSMC1P13-201ENST00000458195 985 ntBASIC2.77□□□□□ -1.97
VPS13CQ709C8 RPS29P26-201ENST00000477483 171 ntBASIC2.77□□□□□ -1.97
VPS13CQ709C8 FAM172BP-201ENST00000487497 1089 ntBASIC2.77□□□□□ -1.97
VPS13CQ709C8 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS13CQ709C8 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS13CQ709C8 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS13CQ709C8 PSMA2P1-201ENST00000526365 646 ntBASIC2.77□□□□□ -1.97
VPS13CQ709C8 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.77□□□□□ -1.97
VPS13CQ709C8 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS13CQ709C8 AC245100.7-201ENST00000609678 442 ntBASIC2.77□□□□□ -1.97
VPS13CQ709C8 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC2.77□□□□□ -1.97
VPS13CQ709C8 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC2.77□□□□□ -1.97
VPS13CQ709C8 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13CQ709C8 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13CQ709C8 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13CQ709C8 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13CQ709C8 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13CQ709C8 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
VPS13CQ709C8 AL031679.1-201ENST00000400616 525 ntBASIC2.77□□□□□ -1.97
VPS13CQ709C8 SRIP2-201ENST00000428470 166 ntBASIC2.77□□□□□ -1.97
VPS13CQ709C8 FTH1P1-201ENST00000437933 532 ntBASIC2.77□□□□□ -1.97
VPS13CQ709C8 TPT1P1-201ENST00000458495 518 ntBASIC2.77□□□□□ -1.97
VPS13CQ709C8 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.77□□□□□ -1.97
VPS13CQ709C8 AC138832.1-201ENST00000522871 556 ntBASIC2.77□□□□□ -1.97
VPS13CQ709C8 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13CQ709C8 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.77□□□□□ -1.97
VPS13CQ709C8 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
VPS13CQ709C8 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
VPS13CQ709C8 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
VPS13CQ709C8 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC2.76□□□□□ -1.97
VPS13CQ709C8 AC116096.1-201ENST00000566804 2314 ntBASIC2.76□□□□□ -1.97
VPS13CQ709C8 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
VPS13CQ709C8 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
VPS13CQ709C8 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VPS13CQ709C8 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS13CQ709C8 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS13CQ709C8 AC132942.1-201ENST00000486753 483 ntBASIC2.76□□□□□ -1.97
VPS13CQ709C8 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.76□□□□□ -1.97
VPS13CQ709C8 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS13CQ709C8 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS13CQ709C8 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
VPS13CQ709C8 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
VPS13CQ709C8 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VPS13CQ709C8 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS13CQ709C8 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS13CQ709C8 VN1R8P-201ENST00000407739 893 ntBASIC2.76□□□□□ -1.97
VPS13CQ709C8 RPS29P31-201ENST00000446147 164 ntBASIC2.76□□□□□ -1.97
VPS13CQ709C8 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS13CQ709C8 H3F3AP1-201ENST00000559984 334 ntBASIC2.76□□□□□ -1.97
VPS13CQ709C8 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS13CQ709C8 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
VPS13CQ709C8 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VPS13CQ709C8 RNA5SP42-201ENST00000364278 115 ntBASIC2.76□□□□□ -1.97
VPS13CQ709C8 MIR504-201ENST00000385065 83 ntBASIC2.76□□□□□ -1.97
VPS13CQ709C8 AC010655.1-201ENST00000449336 292 ntBASIC2.76□□□□□ -1.97
VPS13CQ709C8 RN7SL863P-201ENST00000462370 296 ntBASIC2.76□□□□□ -1.97
VPS13CQ709C8 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS13CQ709C8 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS13CQ709C8 CYCSP41-201ENST00000616920 296 ntBASIC2.76□□□□□ -1.97
VPS13CQ709C8 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VPS13CQ709C8 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VPS13CQ709C8 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
VPS13CQ709C8 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VPS13CQ709C8 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13CQ709C8 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13CQ709C8 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13CQ709C8 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC2.75□□□□□ -1.97
VPS13CQ709C8 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS13CQ709C8 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13CQ709C8 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.75□□□□□ -1.97
VPS13CQ709C8 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS13CQ709C8 RPL23AP92-201ENST00000603609 255 ntBASIC2.75□□□□□ -1.97
VPS13CQ709C8 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS13CQ709C8 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
VPS13CQ709C8 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13CQ709C8 GSTM3P2-201ENST00000412746 530 ntBASIC2.75□□□□□ -1.97
VPS13CQ709C8 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13CQ709C8 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS13CQ709C8 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS13CQ709C8 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS13CQ709C8 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS13CQ709C8 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
VPS13CQ709C8 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS13CQ709C8 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13CQ709C8 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS13CQ709C8 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC2.75□□□□□ -1.97
VPS13CQ709C8 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC2.75□□□□□ -1.97
VPS13CQ709C8 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
VPS13CQ709C8 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13CQ709C8 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS13CQ709C8 RPS4XP8-201ENST00000402039 771 ntBASIC2.75□□□□□ -1.97
VPS13CQ709C8 AL138885.1-201ENST00000405921 675 ntBASIC2.75□□□□□ -1.97
VPS13CQ709C8 RN7SL585P-201ENST00000470538 280 ntBASIC2.75□□□□□ -1.97
VPS13CQ709C8 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms