Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 HAUS1P1-201ENST00000505275 832 ntBASIC3.36□□□□□ -1.87
CCDC58Q4VC31 AC093720.1-201ENST00000505681 714 ntBASIC3.36□□□□□ -1.87
CCDC58Q4VC31 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 AC023141.12-201ENST00000512399 199 ntBASIC3.36□□□□□ -1.87
CCDC58Q4VC31 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 NDUFA5P2-201ENST00000519723 344 ntBASIC3.36□□□□□ -1.87
CCDC58Q4VC31 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 RN7SL753P-201ENST00000581238 290 ntBASIC3.36□□□□□ -1.87
CCDC58Q4VC31 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 AC067852.4-201ENST00000590314 478 ntBASIC3.36□□□□□ -1.87
CCDC58Q4VC31 KLKP1-201ENST00000595979 403 ntBASIC3.36□□□□□ -1.87
CCDC58Q4VC31 IPO5P1-202ENST00000600039 287 ntBASIC3.36□□□□□ -1.87
CCDC58Q4VC31 AC013244.1-201ENST00000604279 193 ntBASIC3.36□□□□□ -1.87
CCDC58Q4VC31 AC016877.3-201ENST00000606778 504 ntBASIC3.36□□□□□ -1.87
CCDC58Q4VC31 AC005156.1-201ENST00000613371 573 ntBASIC3.36□□□□□ -1.87
CCDC58Q4VC31 AC114781.5-201ENST00000615297 108 ntBASIC3.36□□□□□ -1.87
CCDC58Q4VC31 AL121890.3-201ENST00000618494 516 ntBASIC3.36□□□□□ -1.87
CCDC58Q4VC31 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC58Q4VC31 MIR192-201ENST00000384915 110 ntBASIC3.35□□□□□ -1.87
CCDC58Q4VC31 RPS4XP9-201ENST00000405151 780 ntBASIC3.35□□□□□ -1.87
CCDC58Q4VC31 AP000567.1-201ENST00000406413 156 ntBASIC3.35□□□□□ -1.87
CCDC58Q4VC31 RNA5SP293-201ENST00000410527 113 ntBASIC3.35□□□□□ -1.87
CCDC58Q4VC31 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC58Q4VC31 AC098592.2-201ENST00000413158 265 ntBASIC3.35□□□□□ -1.87
CCDC58Q4VC31 PRELID3BP11-201ENST00000414230 479 ntBASIC3.35□□□□□ -1.87
CCDC58Q4VC31 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.35□□□□□ -1.87
CCDC58Q4VC31 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC58Q4VC31 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC58Q4VC31 AL772161.1-201ENST00000439130 476 ntBASIC3.35□□□□□ -1.87
CCDC58Q4VC31 AC239367.2-201ENST00000447309 705 ntBASIC3.35□□□□□ -1.87
CCDC58Q4VC31 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC58Q4VC31 RPS23P7-201ENST00000466210 444 ntBASIC3.35□□□□□ -1.87
CCDC58Q4VC31 RPS4XP22-201ENST00000480755 780 ntBASIC3.35□□□□□ -1.87
CCDC58Q4VC31 RPL32P9-201ENST00000487963 407 ntBASIC3.35□□□□□ -1.87
CCDC58Q4VC31 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC58Q4VC31 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC58Q4VC31 RNA5SP380-201ENST00000517190 98 ntBASIC3.35□□□□□ -1.87
CCDC58Q4VC31 RN7SKP289-201ENST00000517244 295 ntBASIC3.35□□□□□ -1.87
CCDC58Q4VC31 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC58Q4VC31 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC58Q4VC31 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC58Q4VC31 NPM1P47-201ENST00000560843 856 ntBASIC3.35□□□□□ -1.87
CCDC58Q4VC31 AC006960.3-201ENST00000561845 705 ntBASIC3.35□□□□□ -1.87
CCDC58Q4VC31 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC58Q4VC31 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.35□□□□□ -1.87
CCDC58Q4VC31 AL354760.1-201ENST00000608357 643 ntBASIC3.35□□□□□ -1.87
CCDC58Q4VC31 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC58Q4VC31 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC58Q4VC31 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC58Q4VC31 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC58Q4VC31 AC005261.4-201ENST00000600047 1385 ntBASIC3.35□□□□□ -1.87
CCDC58Q4VC31 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC58Q4VC31 AC139713.2-214ENST00000642059 1811 ntBASIC3.35□□□□□ -1.87
CCDC58Q4VC31 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CCDC58Q4VC31 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC58Q4VC31 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC58Q4VC31 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC58Q4VC31 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC58Q4VC31 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC58Q4VC31 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC58Q4VC31 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC58Q4VC31 OR4A15-201ENST00000314706 1035 ntBASIC3.34□□□□□ -1.87
CCDC58Q4VC31 AP002088.1-201ENST00000382740 395 ntBASIC3.34□□□□□ -1.87
CCDC58Q4VC31 Z97055.1-201ENST00000419730 712 ntBASIC3.34□□□□□ -1.87
CCDC58Q4VC31 RPL23AP69-201ENST00000431134 458 ntBASIC3.34□□□□□ -1.87
CCDC58Q4VC31 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC58Q4VC31 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC58Q4VC31 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC58Q4VC31 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC58Q4VC31 RPL35AP28-201ENST00000459730 331 ntBASIC3.34□□□□□ -1.87
CCDC58Q4VC31 AC010401.1-201ENST00000463867 348 ntBASIC3.34□□□□□ -1.87
CCDC58Q4VC31 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC58Q4VC31 CYCSP20-201ENST00000473154 315 ntBASIC3.34□□□□□ -1.87
CCDC58Q4VC31 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC58Q4VC31 AC093840.1-201ENST00000511599 336 ntBASIC3.34□□□□□ -1.87
CCDC58Q4VC31 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC58Q4VC31 AP003730.1-201ENST00000524605 285 ntBASIC3.34□□□□□ -1.87
CCDC58Q4VC31 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC58Q4VC31 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC58Q4VC31 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.34□□□□□ -1.87
CCDC58Q4VC31 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC58Q4VC31 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC58Q4VC31 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC58Q4VC31 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC58Q4VC31 AC107294.3-201ENST00000609211 526 ntBASIC3.34□□□□□ -1.87
CCDC58Q4VC31 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC58Q4VC31 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC58Q4VC31 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
CCDC58Q4VC31 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.34□□□□□ -1.88
CCDC58Q4VC31 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms