Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AL512624.1-201ENST00000613638 469 ntBASIC6.93□□□□□ -1.3
CTC1Q2NKJ3 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CTC1Q2NKJ3 U1.41-201ENST00000617626 165 ntBASIC6.93□□□□□ -1.3
CTC1Q2NKJ3 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CTC1Q2NKJ3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CTC1Q2NKJ3 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CTC1Q2NKJ3 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.93□□□□□ -1.3
CTC1Q2NKJ3 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
CTC1Q2NKJ3 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CTC1Q2NKJ3 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CTC1Q2NKJ3 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.93□□□□□ -1.3
CTC1Q2NKJ3 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CTC1Q2NKJ3 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CTC1Q2NKJ3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC6.93□□□□□ -1.3
CTC1Q2NKJ3 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 AL021877.2-201ENST00000624442 10684 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 AC005592.1-201ENST00000566527 1640 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 SNORA51.9-201ENST00000384295 124 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 RNU6-713P-201ENST00000384761 107 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 AL157702.1-201ENST00000398764 426 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 MIR1252-201ENST00000408861 65 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 RN7SKP144-201ENST00000411108 279 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 RN7SKP296-201ENST00000411185 341 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 RPL7AP14-201ENST00000424041 802 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 AC239367.3-201ENST00000428996 814 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 CXCR2P1-202ENST00000443392 1074 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 TMSB4XP3-201ENST00000445144 114 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 SLC31A1P1-201ENST00000451221 567 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 RPL7P5-201ENST00000471472 736 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 RPS4XP14-201ENST00000493072 781 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 AC008945.1-201ENST00000505144 499 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 AC097473.1-201ENST00000508142 408 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 AC060775.1-201ENST00000518241 520 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 AC022616.6-201ENST00000520479 119 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 SUMO2P20-201ENST00000520803 283 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 AP005435.4-201ENST00000529514 284 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 AP003385.6-201ENST00000531603 374 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 AL591767.3-201ENST00000554632 525 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 AC092332.1-201ENST00000563684 829 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 AC125232.2-201ENST00000592457 143 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 OR10AB1P-201ENST00000609613 938 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 MIR193BHG-214ENST00000641765 509 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 SNX18P3-202ENST00000565670 1750 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 RACGAP1P-201ENST00000550663 1879 ntBASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.92□□□□□ -1.3
CTC1Q2NKJ3 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 AC233263.6-201ENST00000631132 1963 ntBASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 Z97989.1-201ENST00000531702 2421 ntBASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 AC005261.2-201ENST00000593427 4258 ntBASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 OFD1P17-201ENST00000437639 3018 ntBASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 RNU6-492P-201ENST00000363035 104 ntBASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 RNU4-7P-201ENST00000364758 141 ntBASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 SUGT1P1-201ENST00000379514 476 ntBASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 RNU6-1081P-201ENST00000384537 107 ntBASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 UQCRBP1-201ENST00000421129 336 ntBASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 MTND6P12-201ENST00000428247 522 ntBASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 RPL7P29-201ENST00000437151 728 ntBASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 AC098831.1-201ENST00000440661 216 ntBASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms