Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC007225.2-201ENST00000562529 256 ntBASIC6.08□□□□□ -1.44
SOX4Q06945 AC093519.1-201ENST00000566109 298 ntBASIC6.08□□□□□ -1.44
SOX4Q06945 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC6.08□□□□□ -1.44
SOX4Q06945 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX4Q06945 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.08□□□□□ -1.44
SOX4Q06945 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX4Q06945 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX4Q06945 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX4Q06945 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX4Q06945 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX4Q06945 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX4Q06945 MIR1302-1-201ENST00000637932 143 ntBASIC6.08□□□□□ -1.44
SOX4Q06945 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX4Q06945 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.08□□□□□ -1.44
SOX4Q06945 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SOX4Q06945 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SOX4Q06945 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX4Q06945 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.07□□□□□ -1.44
SOX4Q06945 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.07□□□□□ -1.44
SOX4Q06945 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.07□□□□□ -1.44
SOX4Q06945 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SOX4Q06945 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SOX4Q06945 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SOX4Q06945 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SOX4Q06945 SNORD115.1-201ENST00000391109 76 ntBASIC6.07□□□□□ -1.44
SOX4Q06945 AC073264.1-201ENST00000411508 416 ntBASIC6.07□□□□□ -1.44
SOX4Q06945 RAB28P1-201ENST00000411517 641 ntBASIC6.07□□□□□ -1.44
SOX4Q06945 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC6.07□□□□□ -1.44
SOX4Q06945 RIMKLBP2-201ENST00000424737 654 ntBASIC6.07□□□□□ -1.44
SOX4Q06945 AL589872.1-201ENST00000426602 288 ntBASIC6.07□□□□□ -1.44
SOX4Q06945 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.07□□□□□ -1.44
SOX4Q06945 Z80107.2-201ENST00000445127 392 ntBASIC6.07□□□□□ -1.44
SOX4Q06945 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC6.07□□□□□ -1.44
SOX4Q06945 RPL12P39-201ENST00000455456 496 ntBASIC6.07□□□□□ -1.44
SOX4Q06945 BTF3P5-201ENST00000457252 467 ntBASIC6.07□□□□□ -1.44
SOX4Q06945 AC097493.1-201ENST00000463958 372 ntBASIC6.07□□□□□ -1.44
SOX4Q06945 AC015724.1-201ENST00000478577 156 ntBASIC6.07□□□□□ -1.44
SOX4Q06945 SIAH1P1-201ENST00000479411 923 ntBASIC6.07□□□□□ -1.44
SOX4Q06945 AC023194.1-201ENST00000493084 308 ntBASIC6.07□□□□□ -1.44
SOX4Q06945 AC108693.1-201ENST00000496068 432 ntBASIC6.07□□□□□ -1.44
SOX4Q06945 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC6.07□□□□□ -1.44
SOX4Q06945 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC6.07□□□□□ -1.44
SOX4Q06945 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.07□□□□□ -1.44
SOX4Q06945 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.07□□□□□ -1.44
SOX4Q06945 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.07□□□□□ -1.44
SOX4Q06945 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.07□□□□□ -1.44
SOX4Q06945 AC007151.1-201ENST00000572774 483 ntBASIC6.07□□□□□ -1.44
SOX4Q06945 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC6.07□□□□□ -1.44
SOX4Q06945 AL359999.1-201ENST00000604513 294 ntBASIC6.07□□□□□ -1.44
SOX4Q06945 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC6.07□□□□□ -1.44
SOX4Q06945 AC018926.3-201ENST00000618841 406 ntBASIC6.07□□□□□ -1.44
SOX4Q06945 AC005858.4-201ENST00000623191 700 ntBASIC6.07□□□□□ -1.44
SOX4Q06945 AL732618.1-201ENST00000623251 301 ntBASIC6.07□□□□□ -1.44
SOX4Q06945 AC138305.3-201ENST00000624988 240 ntBASIC6.07□□□□□ -1.44
SOX4Q06945 AC026634.1-201ENST00000634369 198 ntBASIC6.07□□□□□ -1.44
SOX4Q06945 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SOX4Q06945 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SOX4Q06945 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SOX4Q06945 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SOX4Q06945 AC024560.2-201ENST00000507981 1497 ntBASIC6.07□□□□□ -1.44
SOX4Q06945 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.07□□□□□ -1.44
SOX4Q06945 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SOX4Q06945 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SOX4Q06945 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SOX4Q06945 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SOX4Q06945 AC005225.5-201ENST00000623547 2225 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
SOX4Q06945 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.06□□□□□ -1.44
SOX4Q06945 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX4Q06945 RNU6-282P-201ENST00000365357 103 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SOX4Q06945 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SOX4Q06945 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.06□□□□□ -1.44
SOX4Q06945 GAPDHP42-201ENST00000406848 981 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 MIR320C1-201ENST00000408566 88 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 CBX1P3-201ENST00000413296 527 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.06□□□□□ -1.44
SOX4Q06945 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SOX4Q06945 RPL7P57-201ENST00000423238 740 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.06□□□□□ -1.44
SOX4Q06945 SEPT14P3-201ENST00000439401 183 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC6.06□□□□□ -1.44
SOX4Q06945 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX4Q06945 AL732372.2-207ENST00000445840 183 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 RPS27AP15-201ENST00000447672 466 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 MTCO1P27-201ENST00000448269 226 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 TRGVB-201ENST00000453257 471 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 SEPT14P2-201ENST00000453405 183 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 AC011225.1-201ENST00000457751 369 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 RN7SL214P-201ENST00000487317 265 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC6.06□□□□□ -1.44
SOX4Q06945 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC6.06□□□□□ -1.44
SOX4Q06945 SEPT14P4-201ENST00000513445 186 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 SNORA19.2-201ENST00000516013 114 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 RNU6-277P-201ENST00000516272 106 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC6.06□□□□□ -1.44
SOX4Q06945 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC6.06□□□□□ -1.44
SOX4Q06945 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 FO082796.1-201ENST00000523795 183 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms