Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 RPL21P11-201ENST00000461458 483 ntBASIC2.94□□□□□ -1.94
HIST1H1AQ02539 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 AC034205.1-201ENST00000520621 638 ntBASIC2.94□□□□□ -1.94
HIST1H1AQ02539 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 AL121576.1-201ENST00000556055 276 ntBASIC2.94□□□□□ -1.94
HIST1H1AQ02539 MIR3939-201ENST00000582614 106 ntBASIC2.94□□□□□ -1.94
HIST1H1AQ02539 RNU4-89P-201ENST00000607443 133 ntBASIC2.94□□□□□ -1.94
HIST1H1AQ02539 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 AL445567.2-201ENST00000618935 498 ntBASIC2.94□□□□□ -1.94
HIST1H1AQ02539 LGI1-209ENST00000627699 664 ntTSL 3 BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 ATE1-AS1-202ENST00000636460 506 ntBASIC2.94□□□□□ -1.94
HIST1H1AQ02539 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 RNA5SP130-201ENST00000364431 114 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 AL034374.1-201ENST00000406329 351 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 HSPE1P8-201ENST00000406997 288 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 ELOCP6-201ENST00000429066 328 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 SBDSP1-204ENST00000453858 737 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 RPS20P32-201ENST00000456044 356 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 ELOCP12-201ENST00000458706 328 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 AC010265.1-201ENST00000513509 211 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 RN7SKP209-201ENST00000516888 304 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 RNA5SP179-201ENST00000517284 121 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 C1GALT1P3-201ENST00000522049 819 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 OR5D17P-201ENST00000531492 978 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 CYCSP29-201ENST00000533731 318 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 UBE2NP1-201ENST00000545592 458 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 AC091167.4-201ENST00000605079 184 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 MLECP1-201ENST00000615893 709 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 AC010435.1-201ENST00000623353 1177 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 AC145207.9-201ENST00000623802 325 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 AC091905.1-201ENST00000624400 311 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 MIR7641-1-201ENST00000627518 61 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 SNORA50A-202ENST00000629536 136 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 CASC19-261ENST00000641853 1638 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 AC021755.1-201ENST00000559747 1447 ntBASIC2.93□□□□□ -1.94
HIST1H1AQ02539 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC2.93□□□□□ -1.94
HIST1H1AQ02539 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 RPS26P8-201ENST00000393490 348 ntBASIC2.92□□□□□ -1.94
HIST1H1AQ02539 SNORA81-201ENST00000408493 178 ntBASIC2.92□□□□□ -1.94
HIST1H1AQ02539 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 ZNF736P2Y-201ENST00000416040 1279 ntBASIC2.92□□□□□ -1.94
HIST1H1AQ02539 AC096644.3-201ENST00000416788 338 ntBASIC2.92□□□□□ -1.94
HIST1H1AQ02539 RPL21P109-201ENST00000422213 475 ntBASIC2.92□□□□□ -1.94
HIST1H1AQ02539 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 GAS5-208ENST00000425771 242 ntTSL 3 BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 HMGN2P21-201ENST00000447764 270 ntBASIC2.92□□□□□ -1.94
HIST1H1AQ02539 RPS17P13-201ENST00000448974 407 ntBASIC2.92□□□□□ -1.94
HIST1H1AQ02539 NANOGP10-201ENST00000453325 895 ntBASIC2.92□□□□□ -1.94
HIST1H1AQ02539 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms