Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.6□□□□□ -1.67
RAE1P78406 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.6□□□□□ -1.67
RAE1P78406 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.6□□□□□ -1.67
RAE1P78406 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RAE1P78406 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.6□□□□□ -1.67
RAE1P78406 IFNNP1-201ENST00000429219 553 ntBASIC4.6□□□□□ -1.67
RAE1P78406 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.6□□□□□ -1.67
RAE1P78406 RPL34P6-201ENST00000432390 345 ntBASIC4.6□□□□□ -1.67
RAE1P78406 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.6□□□□□ -1.67
RAE1P78406 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RAE1P78406 AC004938.1-201ENST00000438468 308 ntBASIC4.6□□□□□ -1.67
RAE1P78406 AC092013.1-201ENST00000438795 332 ntBASIC4.6□□□□□ -1.67
RAE1P78406 NPM1P33-201ENST00000438918 872 ntBASIC4.6□□□□□ -1.67
RAE1P78406 AC073850.1-201ENST00000449243 255 ntBASIC4.6□□□□□ -1.67
RAE1P78406 RPL23AP15-201ENST00000450202 459 ntBASIC4.6□□□□□ -1.67
RAE1P78406 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.6□□□□□ -1.67
RAE1P78406 RPL23AP35-201ENST00000451906 501 ntBASIC4.6□□□□□ -1.67
RAE1P78406 AL591473.1-201ENST00000464297 313 ntBASIC4.6□□□□□ -1.67
RAE1P78406 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.6□□□□□ -1.67
RAE1P78406 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RAE1P78406 LTV1P1-201ENST00000510683 1237 ntBASIC4.6□□□□□ -1.67
RAE1P78406 RNY4P37-201ENST00000516225 96 ntBASIC4.6□□□□□ -1.67
RAE1P78406 RPL12P22-201ENST00000519073 490 ntBASIC4.6□□□□□ -1.67
RAE1P78406 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.6□□□□□ -1.67
RAE1P78406 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.6□□□□□ -1.67
RAE1P78406 ARL2BPP5-201ENST00000523141 481 ntBASIC4.6□□□□□ -1.67
RAE1P78406 HIGD1AP10-201ENST00000527837 282 ntBASIC4.6□□□□□ -1.67
RAE1P78406 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.6□□□□□ -1.67
RAE1P78406 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RAE1P78406 OR7K1P-201ENST00000546439 926 ntBASIC4.6□□□□□ -1.67
RAE1P78406 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.6□□□□□ -1.67
RAE1P78406 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.6□□□□□ -1.67
RAE1P78406 FKBP1BP1-201ENST00000553366 325 ntBASIC4.6□□□□□ -1.67
RAE1P78406 SERPINE4P-201ENST00000554978 281 ntBASIC4.6□□□□□ -1.67
RAE1P78406 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.6□□□□□ -1.67
RAE1P78406 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.6□□□□□ -1.67
RAE1P78406 AL512347.1-201ENST00000566420 503 ntBASIC4.6□□□□□ -1.67
RAE1P78406 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.6□□□□□ -1.67
RAE1P78406 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.6□□□□□ -1.67
RAE1P78406 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.6□□□□□ -1.67
RAE1P78406 AC010200.2-201ENST00000605098 235 ntBASIC4.6□□□□□ -1.67
RAE1P78406 IMMP1LP1-201ENST00000605170 488 ntBASIC4.6□□□□□ -1.67
RAE1P78406 AC007497.1-201ENST00000610421 561 ntBASIC4.6□□□□□ -1.67
RAE1P78406 AL121612.2-201ENST00000612261 482 ntBASIC4.6□□□□□ -1.67
RAE1P78406 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAE1P78406 AC099063.3-201ENST00000642066 185 ntBASIC4.6□□□□□ -1.67
RAE1P78406 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RAE1P78406 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.6□□□□□ -1.67
RAE1P78406 SOCS5P3-201ENST00000425115 1576 ntBASIC4.6□□□□□ -1.67
RAE1P78406 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RAE1P78406 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RAE1P78406 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAE1P78406 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.6□□□□□ -1.67
RAE1P78406 AC099654.2-201ENST00000433031 1980 ntBASIC4.6□□□□□ -1.67
RAE1P78406 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAE1P78406 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RAE1P78406 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RAE1P78406 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RAE1P78406 AL672167.1-206ENST00000356293 943 ntBASIC4.59□□□□□ -1.67
RAE1P78406 RNU6-216P-201ENST00000363282 104 ntBASIC4.59□□□□□ -1.67
RAE1P78406 Y_RNA.194-201ENST00000363985 102 ntBASIC4.59□□□□□ -1.67
RAE1P78406 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
RAE1P78406 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RAE1P78406 Y_RNA.505-201ENST00000384489 102 ntBASIC4.59□□□□□ -1.67
RAE1P78406 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
RAE1P78406 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RAE1P78406 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.59□□□□□ -1.67
RAE1P78406 PRRC2CP1-201ENST00000404428 159 ntBASIC4.59□□□□□ -1.67
RAE1P78406 AP000580.1-201ENST00000404439 358 ntBASIC4.59□□□□□ -1.67
RAE1P78406 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RAE1P78406 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.59□□□□□ -1.67
RAE1P78406 AC093162.1-201ENST00000419682 124 ntBASIC4.59□□□□□ -1.67
RAE1P78406 Z99497.1-201ENST00000421282 135 ntBASIC4.59□□□□□ -1.67
RAE1P78406 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RAE1P78406 MED14P1-201ENST00000430517 648 ntBASIC4.59□□□□□ -1.67
RAE1P78406 RPS17P8-201ENST00000434525 335 ntBASIC4.59□□□□□ -1.67
RAE1P78406 AL451139.1-201ENST00000434718 346 ntBASIC4.59□□□□□ -1.67
RAE1P78406 NMNAT1P2-201ENST00000435192 860 ntBASIC4.59□□□□□ -1.67
RAE1P78406 AL118496.1-201ENST00000440201 1812 ntBASIC4.59□□□□□ -1.67
RAE1P78406 MTND2P20-201ENST00000440805 661 ntBASIC4.59□□□□□ -1.67
RAE1P78406 ZNF652P1-201ENST00000442420 1309 ntBASIC4.59□□□□□ -1.67
RAE1P78406 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.59□□□□□ -1.67
RAE1P78406 TDGF1P1-201ENST00000445734 527 ntBASIC4.59□□□□□ -1.67
RAE1P78406 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.59□□□□□ -1.67
RAE1P78406 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RAE1P78406 AC112206.1-201ENST00000468416 477 ntBASIC4.59□□□□□ -1.67
RAE1P78406 AC072039.1-201ENST00000477611 581 ntBASIC4.59□□□□□ -1.67
RAE1P78406 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.59□□□□□ -1.67
RAE1P78406 KLRA1P-201ENST00000503499 986 ntBASIC4.59□□□□□ -1.67
RAE1P78406 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.59□□□□□ -1.67
RAE1P78406 HMGB1P28-201ENST00000507778 552 ntBASIC4.59□□□□□ -1.67
RAE1P78406 RPL7L1P13-201ENST00000511702 739 ntBASIC4.59□□□□□ -1.67
RAE1P78406 AC110775.1-201ENST00000513721 462 ntBASIC4.59□□□□□ -1.67
RAE1P78406 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.59□□□□□ -1.67
RAE1P78406 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.59□□□□□ -1.67
RAE1P78406 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.59□□□□□ -1.67
RAE1P78406 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
RAE1P78406 AP003033.1-201ENST00000527244 415 ntBASIC4.59□□□□□ -1.67
RAE1P78406 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.59□□□□□ -1.67
RAE1P78406 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms