Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH13P55290 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH13P55290 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH13P55290 HLA-N-201ENST00000437516 135 ntBASIC4.28□□□□□ -1.72
CDH13P55290 RRM2P4-201ENST00000441721 562 ntBASIC4.28□□□□□ -1.72
CDH13P55290 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH13P55290 RAB11AP1-201ENST00000442978 646 ntBASIC4.28□□□□□ -1.72
CDH13P55290 MRPL42P4-201ENST00000453267 443 ntBASIC4.28□□□□□ -1.72
CDH13P55290 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH13P55290 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH13P55290 DUXAP8-207ENST00000456786 622 ntBASIC4.28□□□□□ -1.72
CDH13P55290 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH13P55290 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH13P55290 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH13P55290 GTF2IP9-201ENST00000502460 301 ntBASIC4.28□□□□□ -1.72
CDH13P55290 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH13P55290 AC110792.2-201ENST00000510278 224 ntBASIC4.28□□□□□ -1.72
CDH13P55290 OR5H4P-201ENST00000510851 923 ntBASIC4.28□□□□□ -1.72
CDH13P55290 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH13P55290 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH13P55290 AC044913.1-201ENST00000557200 430 ntBASIC4.28□□□□□ -1.72
CDH13P55290 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH13P55290 RN7SL339P-201ENST00000580597 296 ntBASIC4.28□□□□□ -1.72
CDH13P55290 AC017076.1-201ENST00000607613 578 ntBASIC4.28□□□□□ -1.72
CDH13P55290 AL021707.7-201ENST00000607991 416 ntBASIC4.28□□□□□ -1.72
CDH13P55290 AP000255.1-201ENST00000610276 676 ntBASIC4.28□□□□□ -1.72
CDH13P55290 DUXAP10-204ENST00000612052 616 ntBASIC4.28□□□□□ -1.72
CDH13P55290 AL592148.2-201ENST00000612210 372 ntBASIC4.28□□□□□ -1.72
CDH13P55290 PART1_2.1-201ENST00000612397 250 ntBASIC4.28□□□□□ -1.72
CDH13P55290 AL035461.2-201ENST00000619201 524 ntBASIC4.28□□□□□ -1.72
CDH13P55290 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH13P55290 AC023510.2-201ENST00000622162 746 ntBASIC4.28□□□□□ -1.72
CDH13P55290 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH13P55290 AC087821.2-201ENST00000637086 450 ntBASIC4.28□□□□□ -1.72
CDH13P55290 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH13P55290 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH13P55290 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
CDH13P55290 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CDH13P55290 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH13P55290 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CDH13P55290 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH13P55290 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH13P55290 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH13P55290 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CDH13P55290 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH13P55290 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.28□□□□□ -1.73
CDH13P55290 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH13P55290 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH13P55290 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH13P55290 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH13P55290 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH13P55290 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
CDH13P55290 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH13P55290 DBF4P1-201ENST00000412976 1892 ntBASIC4.27□□□□□ -1.73
CDH13P55290 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH13P55290 AC016716.1-201ENST00000265882 708 ntBASIC4.27□□□□□ -1.73
CDH13P55290 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH13P55290 RNA5SP87-201ENST00000384155 118 ntBASIC4.27□□□□□ -1.73
CDH13P55290 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CDH13P55290 SNORD66.1-201ENST00000391230 76 ntBASIC4.27□□□□□ -1.73
CDH13P55290 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH13P55290 RNA5SP104-201ENST00000410989 118 ntBASIC4.27□□□□□ -1.73
CDH13P55290 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH13P55290 RPL7AP25-201ENST00000423357 805 ntBASIC4.27□□□□□ -1.73
CDH13P55290 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH13P55290 C1DP1-201ENST00000426049 402 ntBASIC4.27□□□□□ -1.73
CDH13P55290 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH13P55290 AL360081.1-201ENST00000428299 555 ntBASIC4.27□□□□□ -1.73
CDH13P55290 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH13P55290 AL513175.1-201ENST00000431492 780 ntBASIC4.27□□□□□ -1.73
CDH13P55290 EXOSC3P1-201ENST00000448649 500 ntBASIC4.27□□□□□ -1.73
CDH13P55290 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH13P55290 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH13P55290 AP000893.1-201ENST00000474462 794 ntBASIC4.27□□□□□ -1.73
CDH13P55290 AC083982.1-201ENST00000485679 344 ntBASIC4.27□□□□□ -1.73
CDH13P55290 RPL32P9-201ENST00000487963 407 ntBASIC4.27□□□□□ -1.73
CDH13P55290 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH13P55290 ATP1B1P1-201ENST00000509767 915 ntBASIC4.27□□□□□ -1.73
CDH13P55290 AC006499.6-201ENST00000511169 607 ntBASIC4.27□□□□□ -1.73
CDH13P55290 HMGB3P13-201ENST00000511263 607 ntBASIC4.27□□□□□ -1.73
CDH13P55290 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH13P55290 NPM1P6-201ENST00000521088 871 ntBASIC4.27□□□□□ -1.73
CDH13P55290 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH13P55290 PHBP17-201ENST00000528576 541 ntBASIC4.27□□□□□ -1.73
CDH13P55290 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH13P55290 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH13P55290 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH13P55290 AL161713.1-201ENST00000555538 145 ntBASIC4.27□□□□□ -1.73
CDH13P55290 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH13P55290 MTND1P8-201ENST00000571424 950 ntBASIC4.27□□□□□ -1.73
CDH13P55290 AL391001.1-201ENST00000602747 715 ntBASIC4.27□□□□□ -1.73
CDH13P55290 AP005137.2-201ENST00000609238 400 ntBASIC4.27□□□□□ -1.73
CDH13P55290 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH13P55290 AC091046.2-201ENST00000620775 665 ntBASIC4.27□□□□□ -1.73
CDH13P55290 AC091953.3-201ENST00000623220 236 ntBASIC4.27□□□□□ -1.73
CDH13P55290 AC124312.6-202ENST00000623624 418 ntBASIC4.27□□□□□ -1.73
CDH13P55290 AL049536.1-201ENST00000625043 744 ntBASIC4.27□□□□□ -1.73
CDH13P55290 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH13P55290 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH13P55290 AC107081.3-201ENST00000612715 2034 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms