Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.36□□□□□ -1.71
HMGCS2P54868 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
HMGCS2P54868 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.36□□□□□ -1.71
HMGCS2P54868 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
HMGCS2P54868 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGCS2P54868 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HMGCS2P54868 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMGCS2P54868 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HMGCS2P54868 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
HMGCS2P54868 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMGCS2P54868 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.35□□□□□ -1.71
HMGCS2P54868 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HMGCS2P54868 IL6STP1-201ENST00000346911 1020 ntBASIC4.35□□□□□ -1.71
HMGCS2P54868 MIR421-201ENST00000365696 85 ntBASIC4.35□□□□□ -1.71
HMGCS2P54868 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGCS2P54868 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HMGCS2P54868 RN7SKP247-201ENST00000411094 308 ntBASIC4.35□□□□□ -1.71
HMGCS2P54868 AL357078.2-201ENST00000416486 427 ntBASIC4.35□□□□□ -1.71
HMGCS2P54868 OR6K4P-201ENST00000423179 955 ntBASIC4.35□□□□□ -1.71
HMGCS2P54868 FAR1P1-201ENST00000427163 934 ntBASIC4.35□□□□□ -1.71
HMGCS2P54868 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGCS2P54868 AC073063.1-201ENST00000434352 607 ntBASIC4.35□□□□□ -1.71
HMGCS2P54868 AL590762.3-201ENST00000436372 640 ntBASIC4.35□□□□□ -1.71
HMGCS2P54868 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGCS2P54868 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGCS2P54868 MTND5P8-201ENST00000449817 1083 ntBASIC4.35□□□□□ -1.71
HMGCS2P54868 AC073387.1-201ENST00000453261 709 ntBASIC4.35□□□□□ -1.71
HMGCS2P54868 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.35□□□□□ -1.71
HMGCS2P54868 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGCS2P54868 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.35□□□□□ -1.71
HMGCS2P54868 RWDD4P1-201ENST00000488019 565 ntBASIC4.35□□□□□ -1.71
HMGCS2P54868 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.35□□□□□ -1.71
HMGCS2P54868 RNA5SP208-201ENST00000516156 78 ntBASIC4.35□□□□□ -1.71
HMGCS2P54868 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.35□□□□□ -1.71
HMGCS2P54868 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGCS2P54868 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.35□□□□□ -1.71
HMGCS2P54868 AC007458.1-201ENST00000542812 373 ntBASIC4.35□□□□□ -1.71
HMGCS2P54868 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGCS2P54868 AC092868.3-201ENST00000560515 784 ntBASIC4.35□□□□□ -1.71
HMGCS2P54868 AC037471.2-201ENST00000564941 598 ntBASIC4.35□□□□□ -1.71
HMGCS2P54868 AL121834.1-201ENST00000572284 509 ntBASIC4.35□□□□□ -1.71
HMGCS2P54868 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.35□□□□□ -1.71
HMGCS2P54868 AC010591.1-201ENST00000603941 649 ntBASIC4.35□□□□□ -1.71
HMGCS2P54868 AC243654.2-201ENST00000612843 443 ntBASIC4.35□□□□□ -1.71
HMGCS2P54868 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGCS2P54868 MIR7154-201ENST00000620673 73 ntBASIC4.35□□□□□ -1.71
HMGCS2P54868 AC106730.3-201ENST00000624568 641 ntBASIC4.35□□□□□ -1.71
HMGCS2P54868 AC244258.1-201ENST00000637553 1071 ntBASIC4.35□□□□□ -1.71
HMGCS2P54868 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
HMGCS2P54868 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.35□□□□□ -1.71
HMGCS2P54868 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMGCS2P54868 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
HMGCS2P54868 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMGCS2P54868 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMGCS2P54868 AC083843.3-201ENST00000623679 2186 ntBASIC4.34□□□□□ -1.71
HMGCS2P54868 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.71
HMGCS2P54868 SNORA27.3-201ENST00000364937 134 ntBASIC4.34□□□□□ -1.71
HMGCS2P54868 AL034403.1-201ENST00000399414 885 ntBASIC4.34□□□□□ -1.71
HMGCS2P54868 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.34□□□□□ -1.71
HMGCS2P54868 MTND2P11-201ENST00000423638 648 ntBASIC4.34□□□□□ -1.71
HMGCS2P54868 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.34□□□□□ -1.71
HMGCS2P54868 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.34□□□□□ -1.71
HMGCS2P54868 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.34□□□□□ -1.71
HMGCS2P54868 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.34□□□□□ -1.71
HMGCS2P54868 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.34□□□□□ -1.71
HMGCS2P54868 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.34□□□□□ -1.71
HMGCS2P54868 AL691517.1-201ENST00000440833 1235 ntBASIC4.34□□□□□ -1.71
HMGCS2P54868 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.34□□□□□ -1.71
HMGCS2P54868 AC021205.1-201ENST00000468797 348 ntBASIC4.34□□□□□ -1.71
HMGCS2P54868 RPL31P61-201ENST00000496160 376 ntBASIC4.34□□□□□ -1.71
HMGCS2P54868 CAB39P1-201ENST00000502277 460 ntBASIC4.34□□□□□ -1.71
HMGCS2P54868 AC108941.1-201ENST00000502853 530 ntBASIC4.34□□□□□ -1.71
HMGCS2P54868 PCNAP1-201ENST00000505363 709 ntBASIC4.34□□□□□ -1.71
HMGCS2P54868 HSPD1P15-201ENST00000505573 1122 ntBASIC4.34□□□□□ -1.71
HMGCS2P54868 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.34□□□□□ -1.71
HMGCS2P54868 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.34□□□□□ -1.71
HMGCS2P54868 AC069240.1-201ENST00000548774 375 ntBASIC4.34□□□□□ -1.71
HMGCS2P54868 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.34□□□□□ -1.71
HMGCS2P54868 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.34□□□□□ -1.71
HMGCS2P54868 MIR5195-201ENST00000583555 115 ntBASIC4.34□□□□□ -1.71
HMGCS2P54868 AC040174.2-201ENST00000602701 465 ntBASIC4.34□□□□□ -1.71
HMGCS2P54868 AC092474.3-201ENST00000603022 568 ntBASIC4.34□□□□□ -1.71
HMGCS2P54868 HMGB1P51-201ENST00000605166 638 ntBASIC4.34□□□□□ -1.71
HMGCS2P54868 AL160281.1-201ENST00000605307 311 ntBASIC4.34□□□□□ -1.71
HMGCS2P54868 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.34□□□□□ -1.71
HMGCS2P54868 RMST_5.1-201ENST00000618704 126 ntBASIC4.34□□□□□ -1.71
HMGCS2P54868 AC074276.2-201ENST00000619891 348 ntBASIC4.34□□□□□ -1.71
HMGCS2P54868 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMGCS2P54868 AC032011.1-201ENST00000611703 1549 ntBASIC4.34□□□□□ -1.71
HMGCS2P54868 AC087190.4-201ENST00000574616 8334 ntBASIC4.34□□□□□ -1.71
HMGCS2P54868 BX005019.1-201ENST00000561881 1810 ntBASIC4.34□□□□□ -1.71
HMGCS2P54868 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.72
HMGCS2P54868 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.33□□□□□ -1.72
HMGCS2P54868 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMGCS2P54868 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMGCS2P54868 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.33□□□□□ -1.72
HMGCS2P54868 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.33□□□□□ -1.72
HMGCS2P54868 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
HMGCS2P54868 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HMGCS2P54868 AC007823.1-201ENST00000569932 1566 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms