Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC5.89□□□□□ -1.47
PMS1P54277 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.89□□□□□ -1.47
PMS1P54277 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.89□□□□□ -1.47
PMS1P54277 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.89□□□□□ -1.47
PMS1P54277 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.89□□□□□ -1.47
PMS1P54277 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.89□□□□□ -1.47
PMS1P54277 AC104785.1-201ENST00000603220 588 ntBASIC5.89□□□□□ -1.47
PMS1P54277 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.89□□□□□ -1.47
PMS1P54277 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PMS1P54277 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.89□□□□□ -1.47
PMS1P54277 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PMS1P54277 AL360270.2-201ENST00000562952 5985 ntBASIC5.89□□□□□ -1.47
PMS1P54277 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.89□□□□□ -1.47
PMS1P54277 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
PMS1P54277 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PMS1P54277 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PMS1P54277 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.89□□□□□ -1.47
PMS1P54277 AC022031.1-201ENST00000585985 2593 ntBASIC5.89□□□□□ -1.47
PMS1P54277 CASC19-204ENST00000641001 2055 ntBASIC5.89□□□□□ -1.47
PMS1P54277 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PMS1P54277 AL034370.1-201ENST00000397254 1590 ntBASIC5.89□□□□□ -1.47
PMS1P54277 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PMS1P54277 AC092376.2-201ENST00000622621 4116 ntBASIC5.89□□□□□ -1.47
PMS1P54277 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
PMS1P54277 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
PMS1P54277 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PMS1P54277 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.88□□□□□ -1.47
PMS1P54277 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PMS1P54277 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.88□□□□□ -1.47
PMS1P54277 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PMS1P54277 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
PMS1P54277 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.88□□□□□ -1.47
PMS1P54277 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.88□□□□□ -1.47
PMS1P54277 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PMS1P54277 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PMS1P54277 Y_RNA.296-201ENST00000364930 108 ntBASIC5.88□□□□□ -1.47
PMS1P54277 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PMS1P54277 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.88□□□□□ -1.47
PMS1P54277 SNRPEP2-201ENST00000397592 279 ntBASIC5.88□□□□□ -1.47
PMS1P54277 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PMS1P54277 FCF1P10-201ENST00000407590 479 ntBASIC5.88□□□□□ -1.47
PMS1P54277 RNU2-65P-201ENST00000410162 185 ntBASIC5.88□□□□□ -1.47
PMS1P54277 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.88□□□□□ -1.47
PMS1P54277 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.88□□□□□ -1.47
PMS1P54277 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.88□□□□□ -1.47
PMS1P54277 AL138899.2-201ENST00000439139 499 ntBASIC5.88□□□□□ -1.47
PMS1P54277 AL450263.2-201ENST00000439400 589 ntBASIC5.88□□□□□ -1.47
PMS1P54277 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.88□□□□□ -1.47
PMS1P54277 AC112653.1-201ENST00000443851 386 ntBASIC5.88□□□□□ -1.47
PMS1P54277 MTND2P24-201ENST00000453434 806 ntBASIC5.88□□□□□ -1.47
PMS1P54277 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.88□□□□□ -1.47
PMS1P54277 RPS15AP1-201ENST00000457423 391 ntBASIC5.88□□□□□ -1.47
PMS1P54277 AC017015.1-201ENST00000477387 286 ntBASIC5.88□□□□□ -1.47
PMS1P54277 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.88□□□□□ -1.47
PMS1P54277 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.88□□□□□ -1.47
PMS1P54277 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.88□□□□□ -1.47
PMS1P54277 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.88□□□□□ -1.47
PMS1P54277 AC093809.1-201ENST00000509155 340 ntBASIC5.88□□□□□ -1.47
PMS1P54277 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.88□□□□□ -1.47
PMS1P54277 ARL2BPP6-201ENST00000512757 439 ntBASIC5.88□□□□□ -1.47
PMS1P54277 AC108064.1-201ENST00000513791 460 ntBASIC5.88□□□□□ -1.47
PMS1P54277 AC010342.1-201ENST00000514047 877 ntBASIC5.88□□□□□ -1.47
PMS1P54277 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.88□□□□□ -1.47
PMS1P54277 SNORA18.6-201ENST00000516792 115 ntBASIC5.88□□□□□ -1.47
PMS1P54277 SCARNA16.4-201ENST00000516956 187 ntBASIC5.88□□□□□ -1.47
PMS1P54277 AC112191.2-201ENST00000522428 333 ntBASIC5.88□□□□□ -1.47
PMS1P54277 ARL2BPP5-201ENST00000523141 481 ntBASIC5.88□□□□□ -1.47
PMS1P54277 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.88□□□□□ -1.47
PMS1P54277 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.88□□□□□ -1.47
PMS1P54277 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.88□□□□□ -1.47
PMS1P54277 AC017100.2-201ENST00000584628 355 ntBASIC5.88□□□□□ -1.47
PMS1P54277 AC006504.3-201ENST00000586818 523 ntBASIC5.88□□□□□ -1.47
PMS1P54277 AC115085.1-201ENST00000588924 229 ntBASIC5.88□□□□□ -1.47
PMS1P54277 BNIP3P33-201ENST00000598912 569 ntBASIC5.88□□□□□ -1.47
PMS1P54277 FO393422.1-201ENST00000603908 708 ntBASIC5.88□□□□□ -1.47
PMS1P54277 AC112191.3-201ENST00000604371 277 ntBASIC5.88□□□□□ -1.47
PMS1P54277 AC009027.1-201ENST00000604510 479 ntBASIC5.88□□□□□ -1.47
PMS1P54277 AL161729.4-201ENST00000604650 476 ntBASIC5.88□□□□□ -1.47
PMS1P54277 MIR6839-201ENST00000620425 113 ntBASIC5.88□□□□□ -1.47
PMS1P54277 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.88□□□□□ -1.47
PMS1P54277 MIR3688-2-201ENST00000636963 87 ntBASIC5.88□□□□□ -1.47
PMS1P54277 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
PMS1P54277 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
PMS1P54277 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PMS1P54277 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PMS1P54277 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.88□□□□□ -1.47
PMS1P54277 AP001284.1-201ENST00000528393 2118 ntBASIC5.87□□□□□ -1.47
PMS1P54277 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PMS1P54277 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PMS1P54277 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.87□□□□□ -1.47
PMS1P54277 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.87□□□□□ -1.47
PMS1P54277 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.87□□□□□ -1.47
PMS1P54277 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
PMS1P54277 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PMS1P54277 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
PMS1P54277 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.87□□□□□ -1.47
PMS1P54277 RNU6-657P-201ENST00000383904 107 ntBASIC5.87□□□□□ -1.47
PMS1P54277 Y_RNA.450-201ENST00000384198 113 ntBASIC5.87□□□□□ -1.47
PMS1P54277 AL590002.1-201ENST00000406554 418 ntBASIC5.87□□□□□ -1.47
PMS1P54277 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms