Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
MSH6P52701 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
MSH6P52701 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MSH6P52701 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC5.07□□□□□ -1.6
MSH6P52701 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.07□□□□□ -1.6
MSH6P52701 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MSH6P52701 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MSH6P52701 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
MSH6P52701 RNU4-44P-201ENST00000363050 141 ntBASIC5.06□□□□□ -1.6
MSH6P52701 RNU6-301P-201ENST00000384277 107 ntBASIC5.06□□□□□ -1.6
MSH6P52701 SMC4P1-201ENST00000414479 527 ntBASIC5.06□□□□□ -1.6
MSH6P52701 AL160175.1-201ENST00000428124 247 ntBASIC5.06□□□□□ -1.6
MSH6P52701 RPL12P46-201ENST00000436610 195 ntBASIC5.06□□□□□ -1.6
MSH6P52701 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.06□□□□□ -1.6
MSH6P52701 RPL21P8-201ENST00000465083 535 ntBASIC5.06□□□□□ -1.6
MSH6P52701 S100A11P2-201ENST00000467589 312 ntBASIC5.06□□□□□ -1.6
MSH6P52701 AC037198.2-201ENST00000478845 733 ntBASIC5.06□□□□□ -1.6
MSH6P52701 AC093663.1-201ENST00000497190 394 ntBASIC5.06□□□□□ -1.6
MSH6P52701 AC097462.2-201ENST00000504623 481 ntBASIC5.06□□□□□ -1.6
MSH6P52701 RFPL4AP5-201ENST00000514977 504 ntBASIC5.06□□□□□ -1.6
MSH6P52701 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.06□□□□□ -1.6
MSH6P52701 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MSH6P52701 MIR5680-201ENST00000577577 84 ntBASIC5.06□□□□□ -1.6
MSH6P52701 AL122125.1-201ENST00000616999 600 ntBASIC5.06□□□□□ -1.6
MSH6P52701 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
MSH6P52701 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MSH6P52701 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MSH6P52701 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MSH6P52701 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
MSH6P52701 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
MSH6P52701 KPNA2P2-201ENST00000419546 1489 ntBASIC5.06□□□□□ -1.6
MSH6P52701 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MSH6P52701 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MSH6P52701 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
MSH6P52701 SNORD17-201ENST00000390930 237 ntBASIC5.05□□□□□ -1.6
MSH6P52701 AL034403.1-201ENST00000399414 885 ntBASIC5.05□□□□□ -1.6
MSH6P52701 OR51A6P-201ENST00000418680 1004 ntBASIC5.05□□□□□ -1.6
MSH6P52701 DBIP2-201ENST00000419076 262 ntBASIC5.05□□□□□ -1.6
MSH6P52701 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.05□□□□□ -1.6
MSH6P52701 AC013410.1-201ENST00000436223 1232 ntBASIC5.05□□□□□ -1.6
MSH6P52701 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.05□□□□□ -1.6
MSH6P52701 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.05□□□□□ -1.6
MSH6P52701 SEPT14P1-201ENST00000458703 648 ntBASIC5.05□□□□□ -1.6
MSH6P52701 AC084198.1-201ENST00000477747 402 ntBASIC5.05□□□□□ -1.6
MSH6P52701 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC5.05□□□□□ -1.6
MSH6P52701 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.05□□□□□ -1.6
MSH6P52701 RNA5SP154-201ENST00000516193 111 ntBASIC5.05□□□□□ -1.6
MSH6P52701 AC022882.1-201ENST00000532142 501 ntBASIC5.05□□□□□ -1.6
MSH6P52701 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.05□□□□□ -1.6
MSH6P52701 MIR5004-201ENST00000579078 107 ntBASIC5.05□□□□□ -1.6
MSH6P52701 MIR4672-201ENST00000583126 81 ntBASIC5.05□□□□□ -1.6
MSH6P52701 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
MSH6P52701 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.05□□□□□ -1.6
MSH6P52701 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5.05□□□□□ -1.6
MSH6P52701 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
MSH6P52701 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
MSH6P52701 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
MSH6P52701 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
MSH6P52701 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
MSH6P52701 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
MSH6P52701 MIR93-201ENST00000385024 80 ntBASIC5.04□□□□□ -1.6
MSH6P52701 UBE2V1P2-201ENST00000397758 440 ntBASIC5.04□□□□□ -1.6
MSH6P52701 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC5.04□□□□□ -1.6
MSH6P52701 RANP7-201ENST00000418085 644 ntBASIC5.04□□□□□ -1.6
MSH6P52701 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.04□□□□□ -1.6
MSH6P52701 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.04□□□□□ -1.6
MSH6P52701 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.04□□□□□ -1.6
MSH6P52701 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.04□□□□□ -1.6
MSH6P52701 RPL27AP5-201ENST00000469428 449 ntBASIC5.04□□□□□ -1.6
MSH6P52701 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.04□□□□□ -1.6
MSH6P52701 AC010653.1-201ENST00000571108 881 ntBASIC5.04□□□□□ -1.6
MSH6P52701 AL162274.2-201ENST00000614406 332 ntBASIC5.04□□□□□ -1.6
MSH6P52701 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
MSH6P52701 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.04□□□□□ -1.6
MSH6P52701 AC092111.2-201ENST00000611627 1414 ntBASIC5.04□□□□□ -1.6
MSH6P52701 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
MSH6P52701 SNORA80A-201ENST00000363922 136 ntBASIC5.04□□□□□ -1.6
MSH6P52701 RHOT1P2-201ENST00000366423 333 ntBASIC5.04□□□□□ -1.6
MSH6P52701 RNA5SP306-201ENST00000411087 107 ntBASIC5.04□□□□□ -1.6
MSH6P52701 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.04□□□□□ -1.6
MSH6P52701 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.04□□□□□ -1.6
MSH6P52701 SEPT7P3-201ENST00000455017 621 ntBASIC5.04□□□□□ -1.6
MSH6P52701 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.04□□□□□ -1.6
MSH6P52701 AC011825.1-201ENST00000484967 388 ntBASIC5.04□□□□□ -1.6
MSH6P52701 RNU6-1334P-201ENST00000516032 105 ntBASIC5.04□□□□□ -1.6
MSH6P52701 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.04□□□□□ -1.6
MSH6P52701 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.04□□□□□ -1.6
MSH6P52701 AL139395.1-201ENST00000603662 160 ntBASIC5.04□□□□□ -1.6
MSH6P52701 AC009237.17-201ENST00000618111 748 ntBASIC5.04□□□□□ -1.6
MSH6P52701 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MSH6P52701 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
MSH6P52701 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MSH6P52701 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
MSH6P52701 ZNF807-201ENST00000328088 1707 ntBASIC5.03□□□□□ -1.6
MSH6P52701 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MSH6P52701 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
MSH6P52701 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
MSH6P52701 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
MSH6P52701 AC000123.3-201ENST00000624029 4975 ntBASIC5.03□□□□□ -1.6
MSH6P52701 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms