Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.16□□□□□ -1.74
CASP4P49662 MIR4286-201ENST00000580651 93 ntBASIC4.16□□□□□ -1.74
CASP4P49662 VN1R85P-201ENST00000601587 426 ntBASIC4.16□□□□□ -1.74
CASP4P49662 AL137849.1-201ENST00000604767 169 ntBASIC4.16□□□□□ -1.74
CASP4P49662 AC100814.1-201ENST00000606963 623 ntBASIC4.16□□□□□ -1.74
CASP4P49662 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.16□□□□□ -1.74
CASP4P49662 AF001550.2-201ENST00000636643 217 ntBASIC4.16□□□□□ -1.74
CASP4P49662 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
CASP4P49662 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.15□□□□□ -1.74
CASP4P49662 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CASP4P49662 RN7SKP280-201ENST00000364196 304 ntBASIC4.15□□□□□ -1.75
CASP4P49662 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.15□□□□□ -1.75
CASP4P49662 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.75
CASP4P49662 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CASP4P49662 AC013404.1-201ENST00000413068 249 ntBASIC4.15□□□□□ -1.75
CASP4P49662 AL160175.1-201ENST00000428124 247 ntBASIC4.15□□□□□ -1.75
CASP4P49662 OR4F13P-201ENST00000428478 931 ntBASIC4.15□□□□□ -1.75
CASP4P49662 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.15□□□□□ -1.75
CASP4P49662 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.15□□□□□ -1.75
CASP4P49662 CYCSP53-201ENST00000455540 265 ntBASIC4.15□□□□□ -1.75
CASP4P49662 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.15□□□□□ -1.75
CASP4P49662 RPL23AP71-201ENST00000470966 469 ntBASIC4.15□□□□□ -1.75
CASP4P49662 SYT14P1-201ENST00000481459 721 ntBASIC4.15□□□□□ -1.75
CASP4P49662 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.15□□□□□ -1.75
CASP4P49662 SNORD116-26-201ENST00000516006 96 ntBASIC4.15□□□□□ -1.75
CASP4P49662 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.15□□□□□ -1.75
CASP4P49662 AC135001.1-201ENST00000544546 283 ntBASIC4.15□□□□□ -1.75
CASP4P49662 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.15□□□□□ -1.75
CASP4P49662 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.15□□□□□ -1.75
CASP4P49662 MIR4716-201ENST00000579628 84 ntBASIC4.15□□□□□ -1.75
CASP4P49662 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.15□□□□□ -1.75
CASP4P49662 AC005255.1-201ENST00000593748 216 ntBASIC4.15□□□□□ -1.75
CASP4P49662 MTCO3P22-201ENST00000603219 784 ntBASIC4.15□□□□□ -1.75
CASP4P49662 BRDTP1-201ENST00000605735 677 ntBASIC4.15□□□□□ -1.75
CASP4P49662 SNORA62.6-201ENST00000606322 83 ntBASIC4.15□□□□□ -1.75
CASP4P49662 AC099676.1-201ENST00000608886 657 ntBASIC4.15□□□□□ -1.75
CASP4P49662 AC024941.1-201ENST00000612250 334 ntBASIC4.15□□□□□ -1.75
CASP4P49662 AC009318.3-201ENST00000616916 503 ntBASIC4.15□□□□□ -1.75
CASP4P49662 AL354798.1-201ENST00000622505 329 ntBASIC4.15□□□□□ -1.75
CASP4P49662 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
CASP4P49662 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
CASP4P49662 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.15□□□□□ -1.75
CASP4P49662 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CASP4P49662 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CASP4P49662 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CASP4P49662 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.14□□□□□ -1.75
CASP4P49662 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.14□□□□□ -1.75
CASP4P49662 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CASP4P49662 AL590623.1-201ENST00000427864 105 ntBASIC4.14□□□□□ -1.75
CASP4P49662 RPS24P8-201ENST00000431490 402 ntBASIC4.14□□□□□ -1.75
CASP4P49662 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.14□□□□□ -1.75
CASP4P49662 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.14□□□□□ -1.75
CASP4P49662 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.14□□□□□ -1.75
CASP4P49662 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.14□□□□□ -1.75
CASP4P49662 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.14□□□□□ -1.75
CASP4P49662 UBDP1-202ENST00000457888 382 ntBASIC4.14□□□□□ -1.75
CASP4P49662 RPL7P48-201ENST00000461513 746 ntBASIC4.14□□□□□ -1.75
CASP4P49662 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CASP4P49662 AC108941.1-201ENST00000502853 530 ntBASIC4.14□□□□□ -1.75
CASP4P49662 AC004069.2-201ENST00000505438 1114 ntBASIC4.14□□□□□ -1.75
CASP4P49662 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.14□□□□□ -1.75
CASP4P49662 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CASP4P49662 AC026402.1-201ENST00000513642 170 ntBASIC4.14□□□□□ -1.75
CASP4P49662 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.14□□□□□ -1.75
CASP4P49662 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.14□□□□□ -1.75
CASP4P49662 HMGB1P46-201ENST00000520062 610 ntBASIC4.14□□□□□ -1.75
CASP4P49662 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.14□□□□□ -1.75
CASP4P49662 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.14□□□□□ -1.75
CASP4P49662 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.14□□□□□ -1.75
CASP4P49662 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.14□□□□□ -1.75
CASP4P49662 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.14□□□□□ -1.75
CASP4P49662 AC022916.3-201ENST00000592961 742 ntBASIC4.14□□□□□ -1.75
CASP4P49662 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CASP4P49662 VN1R84P-201ENST00000593697 235 ntBASIC4.14□□□□□ -1.75
CASP4P49662 AC090525.3-201ENST00000605601 189 ntBASIC4.14□□□□□ -1.75
CASP4P49662 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.14□□□□□ -1.75
CASP4P49662 MIR486-1-201ENST00000612171 68 ntBASIC4.14□□□□□ -1.75
CASP4P49662 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CASP4P49662 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.14□□□□□ -1.75
CASP4P49662 AC091905.1-201ENST00000624400 311 ntBASIC4.14□□□□□ -1.75
CASP4P49662 CDRT1-208ENST00000630868 794 ntBASIC4.14□□□□□ -1.75
CASP4P49662 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CASP4P49662 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.14□□□□□ -1.75
CASP4P49662 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CASP4P49662 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CASP4P49662 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CASP4P49662 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CASP4P49662 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CASP4P49662 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CASP4P49662 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CASP4P49662 AC008725.1-201ENST00000605123 2263 ntBASIC4.13□□□□□ -1.75
CASP4P49662 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CASP4P49662 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.13□□□□□ -1.75
CASP4P49662 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.13□□□□□ -1.75
CASP4P49662 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.13□□□□□ -1.75
CASP4P49662 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
CASP4P49662 RPS6P4-201ENST00000494693 758 ntBASIC4.13□□□□□ -1.75
CASP4P49662 AC093853.1-201ENST00000515689 483 ntBASIC4.13□□□□□ -1.75
CASP4P49662 RNA5SP143-201ENST00000516936 115 ntBASIC4.13□□□□□ -1.75
CASP4P49662 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms