Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4□□□□□ -1.77
HOXA1P49639 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4□□□□□ -1.77
HOXA1P49639 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4□□□□□ -1.77
HOXA1P49639 MRPS36P1-201ENST00000421291 307 ntBASIC4□□□□□ -1.77
HOXA1P49639 TRAPPC2P5-201ENST00000426293 308 ntBASIC4□□□□□ -1.77
HOXA1P49639 Z93242.1-201ENST00000427102 353 ntBASIC4□□□□□ -1.77
HOXA1P49639 AL121776.1-201ENST00000429337 372 ntBASIC4□□□□□ -1.77
HOXA1P49639 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4□□□□□ -1.77
HOXA1P49639 VN1R108P-201ENST00000431580 830 ntBASIC4□□□□□ -1.77
HOXA1P49639 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
HOXA1P49639 RPS20P1-201ENST00000434853 354 ntBASIC4□□□□□ -1.77
HOXA1P49639 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4□□□□□ -1.77
HOXA1P49639 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4□□□□□ -1.77
HOXA1P49639 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4□□□□□ -1.77
HOXA1P49639 SPRYD7P1-201ENST00000443861 570 ntBASIC4□□□□□ -1.77
HOXA1P49639 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4□□□□□ -1.77
HOXA1P49639 FAR2P1-206ENST00000449736 709 ntBASIC4□□□□□ -1.77
HOXA1P49639 ZNF736P5Y-201ENST00000451173 805 ntBASIC4□□□□□ -1.77
HOXA1P49639 RPL21P71-201ENST00000465598 459 ntBASIC4□□□□□ -1.77
HOXA1P49639 RN7SL799P-201ENST00000475891 298 ntBASIC4□□□□□ -1.77
HOXA1P49639 RN7SL717P-201ENST00000478343 297 ntBASIC4□□□□□ -1.77
HOXA1P49639 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXA1P49639 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4□□□□□ -1.77
HOXA1P49639 AC010350.1-201ENST00000504908 231 ntBASIC4□□□□□ -1.77
HOXA1P49639 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4□□□□□ -1.77
HOXA1P49639 AC048346.1-201ENST00000510247 144 ntBASIC4□□□□□ -1.77
HOXA1P49639 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4□□□□□ -1.77
HOXA1P49639 RN7SKP260-201ENST00000516907 149 ntBASIC4□□□□□ -1.77
HOXA1P49639 COX6B1P6-201ENST00000522347 255 ntBASIC4□□□□□ -1.77
HOXA1P49639 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4□□□□□ -1.77
HOXA1P49639 GCSHP4-201ENST00000538792 439 ntBASIC4□□□□□ -1.77
HOXA1P49639 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
HOXA1P49639 AC004825.1-201ENST00000555068 586 ntBASIC4□□□□□ -1.77
HOXA1P49639 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4□□□□□ -1.77
HOXA1P49639 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4□□□□□ -1.77
HOXA1P49639 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4□□□□□ -1.77
HOXA1P49639 AC022069.1-201ENST00000582910 658 ntBASIC4□□□□□ -1.77
HOXA1P49639 PIGPP4-201ENST00000584447 307 ntBASIC4□□□□□ -1.77
HOXA1P49639 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4□□□□□ -1.77
HOXA1P49639 AC020914.4-201ENST00000597690 277 ntBASIC4□□□□□ -1.77
HOXA1P49639 AC006539.2-201ENST00000601729 572 ntBASIC4□□□□□ -1.77
HOXA1P49639 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4□□□□□ -1.77
HOXA1P49639 AL589674.2-201ENST00000604304 337 ntBASIC4□□□□□ -1.77
HOXA1P49639 AC069545.1-201ENST00000605671 358 ntBASIC4□□□□□ -1.77
HOXA1P49639 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4□□□□□ -1.77
HOXA1P49639 AC064807.4-201ENST00000607201 407 ntBASIC4□□□□□ -1.77
HOXA1P49639 RNA5SP440-201ENST00000612665 119 ntBASIC4□□□□□ -1.77
HOXA1P49639 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4□□□□□ -1.77
HOXA1P49639 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4□□□□□ -1.77
HOXA1P49639 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4□□□□□ -1.77
HOXA1P49639 AC121761.2-201ENST00000617300 689 ntBASIC4□□□□□ -1.77
HOXA1P49639 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4□□□□□ -1.77
HOXA1P49639 AC069209.1-201ENST00000619282 651 ntBASIC4□□□□□ -1.77
HOXA1P49639 AC012414.7-202ENST00000622705 1090 ntBASIC4□□□□□ -1.77
HOXA1P49639 AL359757.1-201ENST00000623176 255 ntBASIC4□□□□□ -1.77
HOXA1P49639 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4□□□□□ -1.77
HOXA1P49639 MIR4278-201ENST00000636094 69 ntBASIC4□□□□□ -1.77
HOXA1P49639 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4□□□□□ -1.77
HOXA1P49639 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXA1P49639 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
HOXA1P49639 MARK2P15-201ENST00000432204 2186 ntBASIC4□□□□□ -1.77
HOXA1P49639 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
HOXA1P49639 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
HOXA1P49639 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HOXA1P49639 Z99496.1-201ENST00000469424 1477 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HOXA1P49639 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HOXA1P49639 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HOXA1P49639 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXA1P49639 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXA1P49639 AC016716.1-201ENST00000265882 708 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 RNU6-839P-201ENST00000363347 108 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXA1P49639 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HOXA1P49639 RN7SKP114-201ENST00000410327 279 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXA1P49639 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXA1P49639 AC004074.1-201ENST00000421810 1063 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 AC099336.2-201ENST00000422457 254 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 AC108075.1-201ENST00000424692 529 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXA1P49639 AC005345.1-201ENST00000431868 217 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 THAP5P1-201ENST00000439089 262 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 RPS29P9-201ENST00000440360 171 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 UBE2D3P4-201ENST00000441973 436 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 AC004865.1-201ENST00000442276 1003 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 FHP1-201ENST00000442741 703 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXA1P49639 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXA1P49639 EIF4A1P11-201ENST00000451239 222 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 RPL12P26-201ENST00000452430 487 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC3.99□□□□□ -1.77
HOXA1P49639 RFC5P1-201ENST00000454419 874 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 AC099560.2-201ENST00000457554 255 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HOXA1P49639 RPS26P15-201ENST00000488067 348 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXA1P49639 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms