Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CENPFP49454 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CENPFP49454 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.79□□□□□ -1.8
CENPFP49454 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CENPFP49454 OR5H2-201ENST00000355273 945 ntBASIC3.79□□□□□ -1.8
CENPFP49454 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CENPFP49454 AL139413.1-201ENST00000421309 217 ntBASIC3.79□□□□□ -1.8
CENPFP49454 AC069285.2-201ENST00000440210 275 ntBASIC3.79□□□□□ -1.8
CENPFP49454 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.79□□□□□ -1.8
CENPFP49454 AC099563.1-201ENST00000456086 418 ntBASIC3.79□□□□□ -1.8
CENPFP49454 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC3.79□□□□□ -1.8
CENPFP49454 AC138832.1-201ENST00000522871 556 ntBASIC3.79□□□□□ -1.8
CENPFP49454 AC010503.3-201ENST00000594355 540 ntBASIC3.79□□□□□ -1.8
CENPFP49454 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.79□□□□□ -1.8
CENPFP49454 AC087241.4-201ENST00000612441 480 ntBASIC3.79□□□□□ -1.8
CENPFP49454 AC009159.1-201ENST00000618386 642 ntBASIC3.79□□□□□ -1.8
CENPFP49454 AC010149.2-201ENST00000637608 315 ntBASIC3.79□□□□□ -1.8
CENPFP49454 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CENPFP49454 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CENPFP49454 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CENPFP49454 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CENPFP49454 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CENPFP49454 RSL24D1P1-201ENST00000404972 493 ntBASIC3.79□□□□□ -1.8
CENPFP49454 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.79□□□□□ -1.8
CENPFP49454 BMS1P22-201ENST00000414726 313 ntBASIC3.79□□□□□ -1.8
CENPFP49454 AL139132.1-201ENST00000431587 344 ntBASIC3.79□□□□□ -1.8
CENPFP49454 AL353705.1-201ENST00000433468 480 ntBASIC3.79□□□□□ -1.8
CENPFP49454 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC3.79□□□□□ -1.8
CENPFP49454 RPL7P36-201ENST00000444633 681 ntBASIC3.79□□□□□ -1.8
CENPFP49454 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.79□□□□□ -1.8
CENPFP49454 SLC31A1P1-201ENST00000451221 567 ntBASIC3.79□□□□□ -1.8
CENPFP49454 RPS3AP43-201ENST00000479743 781 ntBASIC3.79□□□□□ -1.8
CENPFP49454 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.79□□□□□ -1.8
CENPFP49454 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.79□□□□□ -1.8
CENPFP49454 MIR7843-201ENST00000622274 79 ntBASIC3.79□□□□□ -1.8
CENPFP49454 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
CENPFP49454 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
CENPFP49454 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CENPFP49454 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.79□□□□□ -1.8
CENPFP49454 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CENPFP49454 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CENPFP49454 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.78□□□□□ -1.8
CENPFP49454 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.78□□□□□ -1.8
CENPFP49454 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.78□□□□□ -1.8
CENPFP49454 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.78□□□□□ -1.8
CENPFP49454 AC012603.1-201ENST00000606424 528 ntBASIC3.78□□□□□ -1.8
CENPFP49454 AC245100.7-201ENST00000609678 442 ntBASIC3.78□□□□□ -1.8
CENPFP49454 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CENPFP49454 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CENPFP49454 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CENPFP49454 DDX6P1-205ENST00000441966 1436 ntBASIC3.78□□□□□ -1.8
CENPFP49454 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
CENPFP49454 VN1R8P-201ENST00000407739 893 ntBASIC3.78□□□□□ -1.8
CENPFP49454 AC073508.1-201ENST00000428866 656 ntBASIC3.78□□□□□ -1.8
CENPFP49454 AF228730.2-201ENST00000438784 848 ntBASIC3.78□□□□□ -1.8
CENPFP49454 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.78□□□□□ -1.8
CENPFP49454 NPM1P13-201ENST00000452663 865 ntBASIC3.78□□□□□ -1.8
CENPFP49454 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.78□□□□□ -1.8
CENPFP49454 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.78□□□□□ -1.8
CENPFP49454 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.78□□□□□ -1.8
CENPFP49454 ZNF826P-207ENST00000622273 1910 ntBASIC3.78□□□□□ -1.8
CENPFP49454 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CENPFP49454 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.78□□□□□ -1.8
CENPFP49454 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CENPFP49454 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CENPFP49454 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CENPFP49454 MIR504-201ENST00000385065 83 ntBASIC3.78□□□□□ -1.81
CENPFP49454 AC009852.2-201ENST00000567898 485 ntBASIC3.78□□□□□ -1.81
CENPFP49454 MIR4524B-201ENST00000581569 115 ntBASIC3.78□□□□□ -1.81
CENPFP49454 AC128687.2-201ENST00000609657 566 ntBASIC3.78□□□□□ -1.81
CENPFP49454 AP003485.2-201ENST00000623636 610 ntBASIC3.78□□□□□ -1.81
CENPFP49454 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.81
CENPFP49454 AC003685.2-201ENST00000422795 395 ntBASIC3.77□□□□□ -1.81
CENPFP49454 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.77□□□□□ -1.81
CENPFP49454 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.77□□□□□ -1.81
CENPFP49454 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.77□□□□□ -1.81
CENPFP49454 AP001207.2-201ENST00000519490 539 ntBASIC3.77□□□□□ -1.81
CENPFP49454 PSMA2P1-201ENST00000526365 646 ntBASIC3.77□□□□□ -1.81
CENPFP49454 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.77□□□□□ -1.81
CENPFP49454 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.77□□□□□ -1.81
CENPFP49454 CYCSP41-201ENST00000616920 296 ntBASIC3.77□□□□□ -1.81
CENPFP49454 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.77□□□□□ -1.81
CENPFP49454 AC139713.2-210ENST00000641741 992 ntBASIC3.77□□□□□ -1.81
CENPFP49454 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
CENPFP49454 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.77□□□□□ -1.81
CENPFP49454 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CENPFP49454 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CENPFP49454 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CENPFP49454 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CENPFP49454 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.77□□□□□ -1.81
CENPFP49454 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.77□□□□□ -1.81
CENPFP49454 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.77□□□□□ -1.81
CENPFP49454 snoU109.6-201ENST00000516831 118 ntBASIC3.77□□□□□ -1.81
CENPFP49454 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CENPFP49454 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.77□□□□□ -1.81
CENPFP49454 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.77□□□□□ -1.81
CENPFP49454 OR5AC4P-202ENST00000642086 985 ntBASIC3.77□□□□□ -1.81
CENPFP49454 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CENPFP49454 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CENPFP49454 AC068647.1-201ENST00000489539 2265 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms