Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 SETP14-201ENST00000497538 873 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 AC017037.1-201ENST00000508460 471 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 RN7SKP34-201ENST00000516142 244 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 RNU1-103P-201ENST00000516502 125 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 RANP9-201ENST00000519957 271 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 GNRHR2P1-201ENST00000555315 631 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 EIF1AXP2-201ENST00000555940 413 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.73□□□□□ -1.81
CXCL12P48061 MIR5186-201ENST00000577504 120 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 AC006116.10-201ENST00000591836 581 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.73□□□□□ -1.81
CXCL12P48061 AC095038.2-201ENST00000621464 1070 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CXCL12P48061 MFSD8-236ENST00000641509 4050 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 ASNSP1-201ENST00000518311 1939 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CXCL12P48061 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.73□□□□□ -1.81
CXCL12P48061 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CXCL12P48061 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
CXCL12P48061 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CXCL12P48061 AC007823.1-201ENST00000569932 1566 ntBASIC3.72□□□□□ -1.81
CXCL12P48061 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CXCL12P48061 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CXCL12P48061 RNU6-984P-201ENST00000363236 109 ntBASIC3.72□□□□□ -1.81
CXCL12P48061 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CXCL12P48061 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.72□□□□□ -1.81
CXCL12P48061 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.72□□□□□ -1.81
CXCL12P48061 AC009302.1-201ENST00000417147 390 ntBASIC3.72□□□□□ -1.81
CXCL12P48061 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CXCL12P48061 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.72□□□□□ -1.81
CXCL12P48061 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.72□□□□□ -1.81
CXCL12P48061 GEMIN8P3-201ENST00000445417 720 ntBASIC3.72□□□□□ -1.81
CXCL12P48061 AC115115.1-201ENST00000449927 248 ntBASIC3.72□□□□□ -1.81
CXCL12P48061 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.72□□□□□ -1.81
CXCL12P48061 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.72□□□□□ -1.81
CXCL12P48061 AC105918.1-201ENST00000474399 838 ntBASIC3.72□□□□□ -1.81
CXCL12P48061 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.72□□□□□ -1.81
CXCL12P48061 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CXCL12P48061 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.72□□□□□ -1.81
CXCL12P48061 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.72□□□□□ -1.81
CXCL12P48061 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.72□□□□□ -1.81
CXCL12P48061 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CXCL12P48061 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.72□□□□□ -1.81
CXCL12P48061 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.72□□□□□ -1.81
CXCL12P48061 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.72□□□□□ -1.81
CXCL12P48061 AL513477.2-201ENST00000607858 568 ntBASIC3.72□□□□□ -1.81
CXCL12P48061 AP000255.1-201ENST00000610276 676 ntBASIC3.72□□□□□ -1.81
CXCL12P48061 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC3.72□□□□□ -1.81
CXCL12P48061 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CXCL12P48061 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CXCL12P48061 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
CXCL12P48061 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CXCL12P48061 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CXCL12P48061 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CXCL12P48061 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CXCL12P48061 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CXCL12P48061 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.72□□□□□ -1.81
CXCL12P48061 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CXCL12P48061 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CXCL12P48061 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CXCL12P48061 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
CXCL12P48061 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
CXCL12P48061 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.71□□□□□ -1.82
CXCL12P48061 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CXCL12P48061 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.71□□□□□ -1.82
CXCL12P48061 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.71□□□□□ -1.82
CXCL12P48061 U3.19-201ENST00000390893 196 ntBASIC3.71□□□□□ -1.82
CXCL12P48061 RNA5SP424-201ENST00000390988 115 ntBASIC3.71□□□□□ -1.82
CXCL12P48061 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CXCL12P48061 SOD2P1-201ENST00000396543 562 ntBASIC3.71□□□□□ -1.82
CXCL12P48061 NCSTNP1-201ENST00000406229 144 ntBASIC3.71□□□□□ -1.82
CXCL12P48061 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.71□□□□□ -1.82
CXCL12P48061 AC245054.1-201ENST00000420944 258 ntBASIC3.71□□□□□ -1.82
CXCL12P48061 AC005326.1-201ENST00000429197 123 ntBASIC3.71□□□□□ -1.82
CXCL12P48061 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.71□□□□□ -1.82
CXCL12P48061 AL035458.1-201ENST00000433096 585 ntBASIC3.71□□□□□ -1.82
CXCL12P48061 AC005019.1-201ENST00000436455 431 ntBASIC3.71□□□□□ -1.82
CXCL12P48061 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CXCL12P48061 SNORA71B-202ENST00000439232 272 ntBASIC3.71□□□□□ -1.82
CXCL12P48061 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.71□□□□□ -1.82
CXCL12P48061 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.71□□□□□ -1.82
CXCL12P48061 RBMY2UP-201ENST00000453474 324 ntBASIC3.71□□□□□ -1.82
CXCL12P48061 AC008155.2-201ENST00000464337 397 ntBASIC3.71□□□□□ -1.82
CXCL12P48061 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.71□□□□□ -1.82
CXCL12P48061 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CXCL12P48061 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.71□□□□□ -1.82
CXCL12P48061 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.71□□□□□ -1.82
CXCL12P48061 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CXCL12P48061 FAM60CP-201ENST00000591086 664 ntBASIC3.71□□□□□ -1.82
CXCL12P48061 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.71□□□□□ -1.82
CXCL12P48061 AL391597.1-201ENST00000618707 694 ntBASIC3.71□□□□□ -1.82
CXCL12P48061 ATE1-AS1-202ENST00000636460 506 ntBASIC3.71□□□□□ -1.82
CXCL12P48061 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CXCL12P48061 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CXCL12P48061 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CXCL12P48061 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.71□□□□□ -1.82
CXCL12P48061 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.7□□□□□ -1.82
CXCL12P48061 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CXCL12P48061 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 185.3 ms