Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CDX1P47902 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.88□□□□□ -1.79
CDX1P47902 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.88□□□□□ -1.79
CDX1P47902 TVP23BP2-201ENST00000455082 615 ntBASIC3.88□□□□□ -1.79
CDX1P47902 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.88□□□□□ -1.79
CDX1P47902 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.88□□□□□ -1.79
CDX1P47902 AC084024.2-201ENST00000503480 791 ntBASIC3.88□□□□□ -1.79
CDX1P47902 GAPDHP56-201ENST00000506031 988 ntBASIC3.88□□□□□ -1.79
CDX1P47902 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.88□□□□□ -1.79
CDX1P47902 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.88□□□□□ -1.79
CDX1P47902 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.88□□□□□ -1.79
CDX1P47902 AC104057.1-201ENST00000515547 497 ntBASIC3.88□□□□□ -1.79
CDX1P47902 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.88□□□□□ -1.79
CDX1P47902 IGLVIV-53-201ENST00000520107 367 ntBASIC3.88□□□□□ -1.79
CDX1P47902 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.88□□□□□ -1.79
CDX1P47902 OR7E13P-201ENST00000526052 910 ntBASIC3.88□□□□□ -1.79
CDX1P47902 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.88□□□□□ -1.79
CDX1P47902 OR8L1P-201ENST00000534005 955 ntBASIC3.88□□□□□ -1.79
CDX1P47902 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.88□□□□□ -1.79
CDX1P47902 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.88□□□□□ -1.79
CDX1P47902 LSM6P2-201ENST00000552208 177 ntBASIC3.88□□□□□ -1.79
CDX1P47902 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.88□□□□□ -1.79
CDX1P47902 BGLT3-201ENST00000564523 994 ntBASIC3.88□□□□□ -1.79
CDX1P47902 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.88□□□□□ -1.79
CDX1P47902 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CDX1P47902 Mico1.1-201ENST00000611698 204 ntBASIC3.88□□□□□ -1.79
CDX1P47902 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.88□□□□□ -1.79
CDX1P47902 AL035461.2-201ENST00000619201 524 ntBASIC3.88□□□□□ -1.79
CDX1P47902 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.88□□□□□ -1.79
CDX1P47902 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.88□□□□□ -1.79
CDX1P47902 OR4G3P-201ENST00000633500 913 ntBASIC3.88□□□□□ -1.79
CDX1P47902 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDX1P47902 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
CDX1P47902 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.88□□□□□ -1.79
CDX1P47902 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
CDX1P47902 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDX1P47902 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CDX1P47902 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.88□□□□□ -1.79
CDX1P47902 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDX1P47902 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDX1P47902 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CDX1P47902 AL136964.1-201ENST00000622038 2990 ntBASIC3.87□□□□□ -1.79
CDX1P47902 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDX1P47902 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.87□□□□□ -1.79
CDX1P47902 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDX1P47902 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDX1P47902 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDX1P47902 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CDX1P47902 AC008549.2-201ENST00000333482 706 ntBASIC3.87□□□□□ -1.79
CDX1P47902 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDX1P47902 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CDX1P47902 RNU6-1226P-201ENST00000384317 107 ntBASIC3.87□□□□□ -1.79
CDX1P47902 RN7SKP216-201ENST00000411050 312 ntBASIC3.87□□□□□ -1.79
CDX1P47902 AL136133.1-201ENST00000413694 376 ntBASIC3.87□□□□□ -1.79
CDX1P47902 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.87□□□□□ -1.79
CDX1P47902 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.87□□□□□ -1.79
CDX1P47902 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.87□□□□□ -1.79
CDX1P47902 BOLA3P4-201ENST00000418151 400 ntBASIC3.87□□□□□ -1.79
CDX1P47902 AC104837.2-201ENST00000427236 424 ntBASIC3.87□□□□□ -1.79
CDX1P47902 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.87□□□□□ -1.79
CDX1P47902 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.87□□□□□ -1.79
CDX1P47902 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.87□□□□□ -1.79
CDX1P47902 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.87□□□□□ -1.79
CDX1P47902 AC079776.3-201ENST00000450665 370 ntBASIC3.87□□□□□ -1.79
CDX1P47902 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.87□□□□□ -1.79
CDX1P47902 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.87□□□□□ -1.79
CDX1P47902 RPS3AP53-201ENST00000454716 778 ntBASIC3.87□□□□□ -1.79
CDX1P47902 AC092324.1-201ENST00000468671 324 ntBASIC3.87□□□□□ -1.79
CDX1P47902 AC010301.1-201ENST00000473936 355 ntBASIC3.87□□□□□ -1.79
CDX1P47902 AC005412.2-201ENST00000492004 341 ntBASIC3.87□□□□□ -1.79
CDX1P47902 AC146944.2-203ENST00000502493 354 ntBASIC3.87□□□□□ -1.79
CDX1P47902 RNF138P1-201ENST00000502765 546 ntBASIC3.87□□□□□ -1.79
CDX1P47902 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.87□□□□□ -1.79
CDX1P47902 BOLA3P3-201ENST00000505182 232 ntBASIC3.87□□□□□ -1.79
CDX1P47902 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.87□□□□□ -1.79
CDX1P47902 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.87□□□□□ -1.79
CDX1P47902 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.87□□□□□ -1.79
CDX1P47902 PPBPP1-201ENST00000510807 373 ntBASIC3.87□□□□□ -1.79
CDX1P47902 AC139495.1-202ENST00000513164 354 ntBASIC3.87□□□□□ -1.79
CDX1P47902 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.87□□□□□ -1.79
CDX1P47902 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.87□□□□□ -1.79
CDX1P47902 ARL2BPP5-201ENST00000523141 481 ntBASIC3.87□□□□□ -1.79
CDX1P47902 MTND1P6-201ENST00000523621 946 ntBASIC3.87□□□□□ -1.79
CDX1P47902 AC021006.3-201ENST00000530771 192 ntBASIC3.87□□□□□ -1.79
CDX1P47902 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CDX1P47902 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC3.87□□□□□ -1.79
CDX1P47902 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.87□□□□□ -1.79
CDX1P47902 MTND3P13-201ENST00000574391 343 ntBASIC3.87□□□□□ -1.79
CDX1P47902 MIR3912-201ENST00000577566 105 ntBASIC3.87□□□□□ -1.79
CDX1P47902 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.87□□□□□ -1.79
CDX1P47902 SNORD39.3-201ENST00000584451 71 ntBASIC3.87□□□□□ -1.79
CDX1P47902 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.87□□□□□ -1.79
CDX1P47902 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.87□□□□□ -1.79
CDX1P47902 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.87□□□□□ -1.79
CDX1P47902 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.87□□□□□ -1.79
CDX1P47902 AC119501.1-201ENST00000603646 475 ntBASIC3.87□□□□□ -1.79
CDX1P47902 AL160237.3-201ENST00000604114 1013 ntBASIC3.87□□□□□ -1.79
CDX1P47902 AL139286.1-201ENST00000604465 483 ntBASIC3.87□□□□□ -1.79
CDX1P47902 AC068722.2-201ENST00000618734 544 ntBASIC3.87□□□□□ -1.79
CDX1P47902 AC067852.7-201ENST00000623270 535 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms