Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RNU6-304P-201ENST00000364855 107 ntBASIC3.7□□□□□ -1.82
HTTP42858 AC128713.1-201ENST00000471495 306 ntBASIC3.7□□□□□ -1.82
HTTP42858 TRBV12-2-201ENST00000489763 344 ntBASIC3.7□□□□□ -1.82
HTTP42858 AC106734.1-201ENST00000568646 663 ntBASIC3.7□□□□□ -1.82
HTTP42858 AC018692.3-201ENST00000623929 123 ntBASIC3.7□□□□□ -1.82
HTTP42858 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.7□□□□□ -1.82
HTTP42858 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC3.7□□□□□ -1.82
HTTP42858 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HTTP42858 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
HTTP42858 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.7□□□□□ -1.82
HTTP42858 SNORA67.4-201ENST00000384688 142 ntBASIC3.7□□□□□ -1.82
HTTP42858 MIR4472-2-201ENST00000582069 67 ntBASIC3.7□□□□□ -1.82
HTTP42858 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC3.7□□□□□ -1.82
HTTP42858 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC3.7□□□□□ -1.82
HTTP42858 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC3.69□□□□□ -1.82
HTTP42858 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
HTTP42858 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.69□□□□□ -1.82
HTTP42858 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HTTP42858 OR4R3P-201ENST00000525084 838 ntBASIC3.69□□□□□ -1.82
HTTP42858 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.69□□□□□ -1.82
HTTP42858 AL133457.1-201ENST00000564251 987 ntBASIC3.69□□□□□ -1.82
HTTP42858 CYCSP39-201ENST00000565821 309 ntBASIC3.69□□□□□ -1.82
HTTP42858 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.69□□□□□ -1.82
HTTP42858 AC006946.3-201ENST00000609791 756 ntBASIC3.69□□□□□ -1.82
HTTP42858 MIR7154-201ENST00000620673 73 ntBASIC3.69□□□□□ -1.82
HTTP42858 ZNF826P-207ENST00000622273 1910 ntBASIC3.69□□□□□ -1.82
HTTP42858 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HTTP42858 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
HTTP42858 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HTTP42858 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
HTTP42858 TXNP1-201ENST00000441872 371 ntBASIC3.69□□□□□ -1.82
HTTP42858 AL035404.1-201ENST00000497982 568 ntBASIC3.69□□□□□ -1.82
HTTP42858 RNU4-29P-201ENST00000515943 174 ntBASIC3.69□□□□□ -1.82
HTTP42858 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC3.69□□□□□ -1.82
HTTP42858 MIR4435-1-201ENST00000582552 80 ntBASIC3.69□□□□□ -1.82
HTTP42858 AC006363.1-201ENST00000603806 463 ntBASIC3.69□□□□□ -1.82
HTTP42858 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
HTTP42858 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.69□□□□□ -1.82
HTTP42858 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.69□□□□□ -1.82
HTTP42858 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HTTP42858 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.69□□□□□ -1.82
HTTP42858 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
HTTP42858 U3.12-201ENST00000364498 214 ntBASIC3.68□□□□□ -1.82
HTTP42858 AL353678.1-201ENST00000422735 741 ntBASIC3.68□□□□□ -1.82
HTTP42858 HIGD1AP12-201ENST00000427832 281 ntBASIC3.68□□□□□ -1.82
HTTP42858 TPTE2P3-201ENST00000441562 1189 ntBASIC3.68□□□□□ -1.82
HTTP42858 HMGB1P3-201ENST00000502802 616 ntBASIC3.68□□□□□ -1.82
HTTP42858 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HTTP42858 UBL5P2-201ENST00000583788 219 ntBASIC3.68□□□□□ -1.82
HTTP42858 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC3.68□□□□□ -1.82
HTTP42858 ZNF90P1-201ENST00000480493 1951 ntBASIC3.68□□□□□ -1.82
HTTP42858 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HTTP42858 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC3.68□□□□□ -1.82
HTTP42858 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.68□□□□□ -1.82
HTTP42858 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.68□□□□□ -1.82
HTTP42858 AL391417.1-201ENST00000404100 426 ntBASIC3.68□□□□□ -1.82
HTTP42858 RPS4XP13-201ENST00000483219 789 ntBASIC3.68□□□□□ -1.82
HTTP42858 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.68□□□□□ -1.82
HTTP42858 AP002404.1-201ENST00000532005 451 ntBASIC3.68□□□□□ -1.82
HTTP42858 AP000916.1-201ENST00000533869 835 ntBASIC3.68□□□□□ -1.82
HTTP42858 CYCSP41-201ENST00000616920 296 ntBASIC3.68□□□□□ -1.82
HTTP42858 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.68□□□□□ -1.82
HTTP42858 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HTTP42858 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HTTP42858 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.68□□□□□ -1.82
HTTP42858 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HTTP42858 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HTTP42858 RNA5SP247-201ENST00000411181 105 ntBASIC3.68□□□□□ -1.82
HTTP42858 AC003685.2-201ENST00000422795 395 ntBASIC3.68□□□□□ -1.82
HTTP42858 HMGN2P27-201ENST00000427352 270 ntBASIC3.68□□□□□ -1.82
HTTP42858 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.68□□□□□ -1.82
HTTP42858 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.68□□□□□ -1.82
HTTP42858 HMGB3P13-201ENST00000511263 607 ntBASIC3.68□□□□□ -1.82
HTTP42858 Y_RNA.676-201ENST00000516393 96 ntBASIC3.68□□□□□ -1.82
HTTP42858 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.68□□□□□ -1.82
HTTP42858 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.68□□□□□ -1.82
HTTP42858 AC068647.1-201ENST00000489539 2265 ntBASIC3.67□□□□□ -1.82
HTTP42858 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HTTP42858 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HTTP42858 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HTTP42858 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HTTP42858 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HTTP42858 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.67□□□□□ -1.82
HTTP42858 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.67□□□□□ -1.82
HTTP42858 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.67□□□□□ -1.82
HTTP42858 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.67□□□□□ -1.82
HTTP42858 H3F3AP1-201ENST00000559984 334 ntBASIC3.67□□□□□ -1.82
HTTP42858 AC010503.3-201ENST00000594355 540 ntBASIC3.67□□□□□ -1.82
HTTP42858 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.67□□□□□ -1.82
HTTP42858 MIR7843-201ENST00000622274 79 ntBASIC3.67□□□□□ -1.82
HTTP42858 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.67□□□□□ -1.82
HTTP42858 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HTTP42858 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HTTP42858 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HTTP42858 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.67□□□□□ -1.82
HTTP42858 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC3.67□□□□□ -1.82
HTTP42858 SRIP2-201ENST00000428470 166 ntBASIC3.67□□□□□ -1.82
HTTP42858 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.67□□□□□ -1.82
HTTP42858 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.67□□□□□ -1.82
HTTP42858 RN7SL594P-201ENST00000470590 287 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms