Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.18□□□□□ -1.74
PTPN4P29074 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPN4P29074 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.18□□□□□ -1.74
PTPN4P29074 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PTPN4P29074 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.18□□□□□ -1.74
PTPN4P29074 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPN4P29074 AC105402.2-201ENST00000438503 358 ntBASIC4.18□□□□□ -1.74
PTPN4P29074 PPIAP17-201ENST00000438507 471 ntBASIC4.18□□□□□ -1.74
PTPN4P29074 AC074367.1-201ENST00000438685 1125 ntBASIC4.18□□□□□ -1.74
PTPN4P29074 AC069540.1-201ENST00000446320 988 ntBASIC4.18□□□□□ -1.74
PTPN4P29074 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPN4P29074 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPN4P29074 AC012170.1-201ENST00000495139 359 ntBASIC4.18□□□□□ -1.74
PTPN4P29074 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPN4P29074 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPN4P29074 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPN4P29074 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPN4P29074 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPN4P29074 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.18□□□□□ -1.74
PTPN4P29074 OSBPL9P3-201ENST00000534523 595 ntBASIC4.18□□□□□ -1.74
PTPN4P29074 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPN4P29074 AC025260.1-201ENST00000548858 430 ntBASIC4.18□□□□□ -1.74
PTPN4P29074 AC084824.1-201ENST00000550917 1005 ntBASIC4.18□□□□□ -1.74
PTPN4P29074 AC025884.1-201ENST00000556034 378 ntBASIC4.18□□□□□ -1.74
PTPN4P29074 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPN4P29074 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPN4P29074 AC078899.5-201ENST00000612475 178 ntBASIC4.18□□□□□ -1.74
PTPN4P29074 ZYXP1-201ENST00000617638 118 ntBASIC4.18□□□□□ -1.74
PTPN4P29074 AC243756.2-201ENST00000618406 463 ntBASIC4.18□□□□□ -1.74
PTPN4P29074 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPN4P29074 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PTPN4P29074 AL049737.1-201ENST00000413920 1403 ntBASIC4.18□□□□□ -1.74
PTPN4P29074 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PTPN4P29074 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN4P29074 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PTPN4P29074 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN4P29074 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN4P29074 LINC02471-203ENST00000641941 4752 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN4P29074 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 AC008033.1-201ENST00000216407 1162 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 MIR3065-201ENST00000390137 79 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 SNORA11F-201ENST00000408237 128 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.17□□□□□ -1.74
PTPN4P29074 AC010385.1-201ENST00000412374 256 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 AC004022.2-201ENST00000413824 193 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 VTA1P1-201ENST00000414044 866 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.17□□□□□ -1.74
PTPN4P29074 RPS12P23-201ENST00000419579 400 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 MORF4L1P7-201ENST00000426038 703 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN4P29074 ATP5HP2-201ENST00000433885 485 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.17□□□□□ -1.74
PTPN4P29074 RPL7P29-201ENST00000437151 728 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.17□□□□□ -1.74
PTPN4P29074 RAD23BP3-201ENST00000454157 1152 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 RPS27AP17-201ENST00000463344 455 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 AC010374.1-201ENST00000503762 1237 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 AC093824.1-201ENST00000508796 343 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.17□□□□□ -1.74
PTPN4P29074 RNA5SP143-201ENST00000516936 115 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.17□□□□□ -1.74
PTPN4P29074 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN4P29074 AL121594.4-201ENST00000556211 1196 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.17□□□□□ -1.74
PTPN4P29074 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.17□□□□□ -1.74
PTPN4P29074 VN1R85P-201ENST00000601587 426 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.17□□□□□ -1.74
PTPN4P29074 AC067959.1-201ENST00000604334 379 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 AC006946.3-201ENST00000609791 756 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 AC024941.1-201ENST00000612250 334 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 MIR6891-201ENST00000618788 93 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.17□□□□□ -1.74
PTPN4P29074 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 CDRT1-208ENST00000630868 794 ntBASIC4.17□□□□□ -1.74
PTPN4P29074 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN4P29074 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN4P29074 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN4P29074 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.17□□□□□ -1.74
PTPN4P29074 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
PTPN4P29074 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PTPN4P29074 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN4P29074 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTPN4P29074 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.16□□□□□ -1.74
PTPN4P29074 MIR331-201ENST00000362302 94 ntBASIC4.16□□□□□ -1.74
PTPN4P29074 RNU6-252P-201ENST00000363232 107 ntBASIC4.16□□□□□ -1.74
PTPN4P29074 RNU1-132P-201ENST00000364300 164 ntBASIC4.16□□□□□ -1.74
PTPN4P29074 RNU6-609P-201ENST00000365459 107 ntBASIC4.16□□□□□ -1.74
PTPN4P29074 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PTPN4P29074 HNRNPDP2-201ENST00000406475 478 ntBASIC4.16□□□□□ -1.74
PTPN4P29074 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTPN4P29074 AMD1P2-201ENST00000412936 992 ntBASIC4.16□□□□□ -1.74
PTPN4P29074 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.16□□□□□ -1.74
PTPN4P29074 RPL23AP38-201ENST00000423801 469 ntBASIC4.16□□□□□ -1.74
PTPN4P29074 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.16□□□□□ -1.74
PTPN4P29074 AL390879.2-203ENST00000426943 1121 ntBASIC4.16□□□□□ -1.74
PTPN4P29074 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.16□□□□□ -1.74
PTPN4P29074 RPS6P12-201ENST00000432491 726 ntBASIC4.16□□□□□ -1.74
PTPN4P29074 AL590762.3-201ENST00000436372 640 ntBASIC4.16□□□□□ -1.74
PTPN4P29074 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms