Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
XPAP23025 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
XPAP23025 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
XPAP23025 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
XPAP23025 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
XPAP23025 Y_RNA.25-201ENST00000362528 102 ntBASIC5.3□□□□□ -1.56
XPAP23025 SNORA17.1-201ENST00000362945 126 ntBASIC5.3□□□□□ -1.56
XPAP23025 RNA5SP507-201ENST00000363603 121 ntBASIC5.3□□□□□ -1.56
XPAP23025 RNA5SP88-201ENST00000365560 109 ntBASIC5.3□□□□□ -1.56
XPAP23025 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
XPAP23025 SPTLC1P2-201ENST00000407089 121 ntBASIC5.3□□□□□ -1.56
XPAP23025 AC007899.1-201ENST00000412776 775 ntBASIC5.3□□□□□ -1.56
XPAP23025 UBTFL3-201ENST00000418934 1024 ntBASIC5.3□□□□□ -1.56
XPAP23025 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.3□□□□□ -1.56
XPAP23025 AC007394.1-201ENST00000421941 531 ntBASIC5.3□□□□□ -1.56
XPAP23025 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.3□□□□□ -1.56
XPAP23025 RPL12P34-201ENST00000424532 479 ntBASIC5.3□□□□□ -1.56
XPAP23025 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.3□□□□□ -1.56
XPAP23025 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.3□□□□□ -1.56
XPAP23025 AC104651.1-201ENST00000427559 735 ntBASIC5.3□□□□□ -1.56
XPAP23025 AL161722.2-201ENST00000434731 981 ntBASIC5.3□□□□□ -1.56
XPAP23025 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.3□□□□□ -1.56
XPAP23025 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.3□□□□□ -1.56
XPAP23025 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.3□□□□□ -1.56
XPAP23025 AL389915.2-201ENST00000454576 441 ntBASIC5.3□□□□□ -1.56
XPAP23025 AL035090.1-201ENST00000454835 332 ntBASIC5.3□□□□□ -1.56
XPAP23025 AC009127.1-201ENST00000467090 155 ntBASIC5.3□□□□□ -1.56
XPAP23025 AP000797.2-201ENST00000475768 606 ntBASIC5.3□□□□□ -1.56
XPAP23025 RN7SL222P-201ENST00000476452 299 ntBASIC5.3□□□□□ -1.56
XPAP23025 UBTFL6-201ENST00000477929 1024 ntBASIC5.3□□□□□ -1.56
XPAP23025 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.3□□□□□ -1.56
XPAP23025 AC090013.1-201ENST00000485147 480 ntBASIC5.3□□□□□ -1.56
XPAP23025 RPL7P41-201ENST00000485823 957 ntBASIC5.3□□□□□ -1.56
XPAP23025 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.3□□□□□ -1.56
XPAP23025 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.3□□□□□ -1.56
XPAP23025 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.3□□□□□ -1.56
XPAP23025 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.3□□□□□ -1.56
XPAP23025 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.3□□□□□ -1.56
XPAP23025 CDC42P4-201ENST00000510507 563 ntBASIC5.3□□□□□ -1.56
XPAP23025 RNU6-202P-201ENST00000515998 96 ntBASIC5.3□□□□□ -1.56
XPAP23025 OR4A43P-201ENST00000532938 908 ntBASIC5.3□□□□□ -1.56
XPAP23025 AC245505.1-201ENST00000556398 224 ntBASIC5.3□□□□□ -1.56
XPAP23025 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.3□□□□□ -1.56
XPAP23025 MIR4801-201ENST00000582704 82 ntBASIC5.3□□□□□ -1.56
XPAP23025 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.3□□□□□ -1.56
XPAP23025 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.3□□□□□ -1.56
XPAP23025 AC012065.4-201ENST00000602445 679 ntBASIC5.3□□□□□ -1.56
XPAP23025 AC009237.13-201ENST00000603193 276 ntBASIC5.3□□□□□ -1.56
XPAP23025 TAS2R6P-201ENST00000605022 826 ntBASIC5.3□□□□□ -1.56
XPAP23025 AC069304.2-201ENST00000605154 435 ntBASIC5.3□□□□□ -1.56
XPAP23025 AC107214.2-201ENST00000608204 634 ntBASIC5.3□□□□□ -1.56
XPAP23025 AC116563.2-201ENST00000624751 535 ntBASIC5.3□□□□□ -1.56
XPAP23025 AC135068.12-201ENST00000637370 931 ntBASIC5.3□□□□□ -1.56
XPAP23025 AC068137.3-201ENST00000639191 341 ntBASIC5.3□□□□□ -1.56
XPAP23025 AC073869.6-201ENST00000640656 341 ntBASIC5.3□□□□□ -1.56
XPAP23025 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
XPAP23025 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.3□□□□□ -1.56
XPAP23025 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
XPAP23025 AC114947.2-201ENST00000565748 2125 ntBASIC5.3□□□□□ -1.56
XPAP23025 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.3□□□□□ -1.56
XPAP23025 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
XPAP23025 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
XPAP23025 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
XPAP23025 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
XPAP23025 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
XPAP23025 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
XPAP23025 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.29□□□□□ -1.56
XPAP23025 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.29□□□□□ -1.56
XPAP23025 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
XPAP23025 AC114546.3-201ENST00000623582 1734 ntBASIC5.29□□□□□ -1.56
XPAP23025 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.29□□□□□ -1.56
XPAP23025 ASNSP1-201ENST00000518311 1939 ntBASIC5.29□□□□□ -1.56
XPAP23025 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.29□□□□□ -1.56
XPAP23025 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
XPAP23025 AC016716.1-201ENST00000265882 708 ntBASIC5.29□□□□□ -1.56
XPAP23025 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.29□□□□□ -1.56
XPAP23025 SNORA70-201ENST00000384436 135 ntBASIC5.29□□□□□ -1.56
XPAP23025 AC136624.1-201ENST00000400791 413 ntBASIC5.29□□□□□ -1.56
XPAP23025 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
XPAP23025 RNU2-66P-201ENST00000410650 161 ntBASIC5.29□□□□□ -1.56
XPAP23025 RN7SKP213-201ENST00000410746 298 ntBASIC5.29□□□□□ -1.56
XPAP23025 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.29□□□□□ -1.56
XPAP23025 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.29□□□□□ -1.56
XPAP23025 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.29□□□□□ -1.56
XPAP23025 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.29□□□□□ -1.56
XPAP23025 AC005033.1-201ENST00000428904 813 ntBASIC5.29□□□□□ -1.56
XPAP23025 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
XPAP23025 PPIAP13-201ENST00000434706 478 ntBASIC5.29□□□□□ -1.56
XPAP23025 MTND1P28-201ENST00000435623 950 ntBASIC5.29□□□□□ -1.56
XPAP23025 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.29□□□□□ -1.56
XPAP23025 AL357520.1-201ENST00000441557 453 ntBASIC5.29□□□□□ -1.56
XPAP23025 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.29□□□□□ -1.56
XPAP23025 AC239809.1-201ENST00000450470 217 ntBASIC5.29□□□□□ -1.56
XPAP23025 SUMO2P2-201ENST00000456482 255 ntBASIC5.29□□□□□ -1.56
XPAP23025 RNA5SP269-201ENST00000459032 137 ntBASIC5.29□□□□□ -1.56
XPAP23025 AC005532.2-201ENST00000467154 373 ntBASIC5.29□□□□□ -1.56
XPAP23025 RPSAP50-201ENST00000481955 852 ntBASIC5.29□□□□□ -1.56
XPAP23025 OR4G11P-201ENST00000492842 939 ntBASIC5.29□□□□□ -1.56
XPAP23025 RPS24P16-201ENST00000497294 392 ntBASIC5.29□□□□□ -1.56
XPAP23025 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms