Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATF4P18848 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATF4P18848 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
ATF4P18848 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATF4P18848 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.37□□□□□ -1.55
ATF4P18848 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ATF4P18848 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATF4P18848 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATF4P18848 SNORA72.1-201ENST00000363485 129 ntBASIC5.37□□□□□ -1.55
ATF4P18848 RN7SKP107-201ENST00000364157 290 ntBASIC5.37□□□□□ -1.55
ATF4P18848 U3.11-201ENST00000364476 212 ntBASIC5.37□□□□□ -1.55
ATF4P18848 U3.14-201ENST00000365363 227 ntBASIC5.37□□□□□ -1.55
ATF4P18848 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
ATF4P18848 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.37□□□□□ -1.55
ATF4P18848 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.37□□□□□ -1.55
ATF4P18848 AC138393.2-201ENST00000414742 246 ntBASIC5.37□□□□□ -1.55
ATF4P18848 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.37□□□□□ -1.55
ATF4P18848 AL807761.1-201ENST00000417622 171 ntBASIC5.37□□□□□ -1.55
ATF4P18848 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.37□□□□□ -1.55
ATF4P18848 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.37□□□□□ -1.55
ATF4P18848 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.37□□□□□ -1.55
ATF4P18848 OR1AA1P-201ENST00000419597 916 ntBASIC5.37□□□□□ -1.55
ATF4P18848 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.37□□□□□ -1.55
ATF4P18848 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC5.37□□□□□ -1.55
ATF4P18848 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.37□□□□□ -1.55
ATF4P18848 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.37□□□□□ -1.55
ATF4P18848 AC016712.1-201ENST00000431088 378 ntBASIC5.37□□□□□ -1.55
ATF4P18848 BNIP3P2-201ENST00000441221 577 ntBASIC5.37□□□□□ -1.55
ATF4P18848 AL161626.1-201ENST00000441480 490 ntBASIC5.37□□□□□ -1.55
ATF4P18848 RPL21P89-201ENST00000444021 467 ntBASIC5.37□□□□□ -1.55
ATF4P18848 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC5.37□□□□□ -1.55
ATF4P18848 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.37□□□□□ -1.55
ATF4P18848 SNORA35.1-201ENST00000458908 128 ntBASIC5.37□□□□□ -1.55
ATF4P18848 RN7SL152P-201ENST00000484176 298 ntBASIC5.37□□□□□ -1.55
ATF4P18848 RN7SL561P-201ENST00000488553 281 ntBASIC5.37□□□□□ -1.55
ATF4P18848 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATF4P18848 EIF3LP3-201ENST00000495197 822 ntBASIC5.37□□□□□ -1.55
ATF4P18848 AC020893.1-201ENST00000502452 580 ntBASIC5.37□□□□□ -1.55
ATF4P18848 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.37□□□□□ -1.55
ATF4P18848 TMEM248P1-201ENST00000510579 951 ntBASIC5.37□□□□□ -1.55
ATF4P18848 RNU2-10P-201ENST00000516375 211 ntBASIC5.37□□□□□ -1.55
ATF4P18848 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC5.37□□□□□ -1.55
ATF4P18848 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATF4P18848 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.37□□□□□ -1.55
ATF4P18848 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC5.37□□□□□ -1.55
ATF4P18848 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC5.37□□□□□ -1.55
ATF4P18848 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC5.37□□□□□ -1.55
ATF4P18848 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.37□□□□□ -1.55
ATF4P18848 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC5.37□□□□□ -1.55
ATF4P18848 AC061975.3-201ENST00000583209 244 ntBASIC5.37□□□□□ -1.55
ATF4P18848 MIR4470-201ENST00000583453 72 ntBASIC5.37□□□□□ -1.55
ATF4P18848 AC105224.1-201ENST00000587055 421 ntBASIC5.37□□□□□ -1.55
ATF4P18848 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.37□□□□□ -1.55
ATF4P18848 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.37□□□□□ -1.55
ATF4P18848 AC025449.1-201ENST00000603896 529 ntBASIC5.37□□□□□ -1.55
ATF4P18848 RN7SL778P-201ENST00000607160 297 ntBASIC5.37□□□□□ -1.55
ATF4P18848 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATF4P18848 AL121782.1-201ENST00000611242 413 ntBASIC5.37□□□□□ -1.55
ATF4P18848 AL603758.1-201ENST00000618654 241 ntBASIC5.37□□□□□ -1.55
ATF4P18848 uc_338.37-201ENST00000620113 186 ntBASIC5.37□□□□□ -1.55
ATF4P18848 AC244100.1-202ENST00000621554 382 ntBASIC5.37□□□□□ -1.55
ATF4P18848 FER-210ENST00000628534 558 ntTSL 5 BASIC5.37□□□□□ -1.55
ATF4P18848 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.37□□□□□ -1.55
ATF4P18848 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.37□□□□□ -1.55
ATF4P18848 CASC19-280ENST00000642102 1351 ntBASIC5.37□□□□□ -1.55
ATF4P18848 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATF4P18848 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATF4P18848 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATF4P18848 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATF4P18848 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.37□□□□□ -1.55
ATF4P18848 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATF4P18848 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.37□□□□□ -1.55
ATF4P18848 CDY19P-201ENST00000411668 1613 ntBASIC5.37□□□□□ -1.55
ATF4P18848 AC090229.1-201ENST00000590983 1609 ntBASIC5.37□□□□□ -1.55
ATF4P18848 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATF4P18848 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ATF4P18848 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
ATF4P18848 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
ATF4P18848 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ATF4P18848 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
ATF4P18848 SNORD56.2-201ENST00000363242 71 ntBASIC5.36□□□□□ -1.55
ATF4P18848 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
ATF4P18848 RNU6-637P-201ENST00000384050 107 ntBASIC5.36□□□□□ -1.55
ATF4P18848 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
ATF4P18848 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATF4P18848 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.36□□□□□ -1.55
ATF4P18848 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.36□□□□□ -1.55
ATF4P18848 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.36□□□□□ -1.55
ATF4P18848 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC5.36□□□□□ -1.55
ATF4P18848 AC092447.6-201ENST00000414578 210 ntBASIC5.36□□□□□ -1.55
ATF4P18848 AL137014.1-201ENST00000420490 1226 ntBASIC5.36□□□□□ -1.55
ATF4P18848 USP9YP9-201ENST00000429406 715 ntBASIC5.36□□□□□ -1.55
ATF4P18848 BX276092.6-201ENST00000430476 250 ntBASIC5.36□□□□□ -1.55
ATF4P18848 MRPS18BP2-201ENST00000434310 759 ntBASIC5.36□□□□□ -1.55
ATF4P18848 SEPT14P3-201ENST00000439401 183 ntBASIC5.36□□□□□ -1.55
ATF4P18848 RPL5P25-201ENST00000441148 775 ntBASIC5.36□□□□□ -1.55
ATF4P18848 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC5.36□□□□□ -1.55
ATF4P18848 AL732372.2-207ENST00000445840 183 ntBASIC5.36□□□□□ -1.55
ATF4P18848 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.36□□□□□ -1.55
ATF4P18848 AC010655.1-201ENST00000449336 292 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms