Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 VTA1P1-201ENST00000414044 866 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 AC017078.1-201ENST00000416146 368 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DOAP06340 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DOAP06340 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DOAP06340 DPY19L1P2-201ENST00000426647 915 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
HLA-DOAP06340 TCEA1P3-201ENST00000443005 880 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 AC007327.1-201ENST00000447461 264 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DOAP06340 AL109741.2-201ENST00000455561 343 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 AC109327.1-201ENST00000471666 403 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.4□□□□□ -1.54
HLA-DOAP06340 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DOAP06340 AC010424.1-201ENST00000506336 297 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.4□□□□□ -1.54
HLA-DOAP06340 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DOAP06340 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC5.4□□□□□ -1.54
HLA-DOAP06340 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DOAP06340 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DOAP06340 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DOAP06340 ATP5F1P7-201ENST00000567330 760 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 MIR5708-201ENST00000579723 85 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 AC023575.1-201ENST00000580510 358 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DOAP06340 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DOAP06340 MIR4660-201ENST00000583549 74 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.4□□□□□ -1.54
HLA-DOAP06340 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DOAP06340 VN1R82P-201ENST00000601481 356 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 AL139286.2-201ENST00000606838 396 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DOAP06340 AC005962.2-201ENST00000611427 652 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 AC015914.2-201ENST00000618167 288 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 AC024023.1-201ENST00000624530 922 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 AC016717.3-201ENST00000624730 554 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 AF001550.2-201ENST00000636643 217 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 AL392088.2-201ENST00000637607 285 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DOAP06340 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DOAP06340 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DOAP06340 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DOAP06340 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DOAP06340 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DOAP06340 AC245100.2-201ENST00000454544 1679 ntBASIC5.4□□□□□ -1.55
HLA-DOAP06340 AC093671.1-201ENST00000624981 2929 ntBASIC5.4□□□□□ -1.55
HLA-DOAP06340 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DOAP06340 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.4□□□□□ -1.55
HLA-DOAP06340 SPATA2P1-201ENST00000431223 2055 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 AC000367.1-201ENST00000452711 1766 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DOAP06340 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.39□□□□□ -1.55
HLA-DOAP06340 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.39□□□□□ -1.55
HLA-DOAP06340 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DOAP06340 RNU6-304P-201ENST00000364855 107 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.39□□□□□ -1.55
HLA-DOAP06340 RNU6-532P-201ENST00000384318 107 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.39□□□□□ -1.55
HLA-DOAP06340 AC004022.2-201ENST00000413824 193 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 AC098592.1-201ENST00000419352 333 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 GAPDHP49-201ENST00000421421 961 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 AC234779.1-201ENST00000425910 285 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.39□□□□□ -1.55
HLA-DOAP06340 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DOAP06340 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.39□□□□□ -1.55
HLA-DOAP06340 AL354941.1-201ENST00000438600 464 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 CBX1P1-201ENST00000440184 427 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 GTF3AP5-201ENST00000442645 697 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 FHP1-201ENST00000442741 703 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 RPS26P30-201ENST00000443431 335 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 PRELID3BP7-201ENST00000503606 469 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.39□□□□□ -1.55
HLA-DOAP06340 HSPE1P23-201ENST00000509838 286 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.39□□□□□ -1.55
HLA-DOAP06340 TOMM20P2-201ENST00000540082 421 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.39□□□□□ -1.55
HLA-DOAP06340 ATP5J2P6-201ENST00000565203 266 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 MTCO1P40-201ENST00000574371 625 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 SNORD39.2-201ENST00000579995 76 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 KPNA2P3-201ENST00000584190 848 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.39□□□□□ -1.55
HLA-DOAP06340 AL031985.2-201ENST00000600955 480 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 AL583832.1-201ENST00000603227 784 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 AC021749.1-201ENST00000604322 607 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 AL590392.1-201ENST00000604960 446 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 AC091979.2-201ENST00000607514 214 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 AC092354.2-201ENST00000607786 514 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 AC092653.1-201ENST00000608509 531 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 VN1R74P-201ENST00000613259 503 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DOAP06340 AL158063.1-201ENST00000615349 536 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 AC009704.2-201ENST00000618739 483 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DOAP06340 AC092656.1-203ENST00000624134 423 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DOAP06340 AC073136.1-201ENST00000449426 2884 ntBASIC5.39□□□□□ -1.55
HLA-DOAP06340 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DOAP06340 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
HLA-DOAP06340 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms