Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC012442.3-202ENST00000636742 206 ntBASIC3.62□□□□□ -1.83
HLA-DQB2P05538 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 AC090337.1-201ENST00000579651 2074 ntBASIC3.62□□□□□ -1.83
HLA-DQB2P05538 AC233968.1-201ENST00000611212 1300 ntBASIC3.62□□□□□ -1.83
HLA-DQB2P05538 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DQB2P05538 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DQB2P05538 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DQB2P05538 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DQB2P05538 AC017079.2-201ENST00000416102 485 ntBASIC3.61□□□□□ -1.83
HLA-DQB2P05538 SYF2P2-201ENST00000417620 583 ntBASIC3.61□□□□□ -1.83
HLA-DQB2P05538 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.61□□□□□ -1.83
HLA-DQB2P05538 AC002075.2-201ENST00000425207 252 ntBASIC3.61□□□□□ -1.83
HLA-DQB2P05538 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DQB2P05538 MRPS18BP2-201ENST00000434310 759 ntBASIC3.61□□□□□ -1.83
HLA-DQB2P05538 RPS20P1-201ENST00000434853 354 ntBASIC3.61□□□□□ -1.83
HLA-DQB2P05538 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.61□□□□□ -1.83
HLA-DQB2P05538 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.61□□□□□ -1.83
HLA-DQB2P05538 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.61□□□□□ -1.83
HLA-DQB2P05538 AL133547.1-201ENST00000448546 220 ntBASIC3.61□□□□□ -1.83
HLA-DQB2P05538 NDUFS5P3-201ENST00000450668 321 ntBASIC3.61□□□□□ -1.83
HLA-DQB2P05538 AC099560.2-201ENST00000457554 255 ntBASIC3.61□□□□□ -1.83
HLA-DQB2P05538 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.61□□□□□ -1.83
HLA-DQB2P05538 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.61□□□□□ -1.83
HLA-DQB2P05538 RPL23AP73-201ENST00000492507 471 ntBASIC3.61□□□□□ -1.83
HLA-DQB2P05538 AL133372.1-201ENST00000493565 745 ntBASIC3.61□□□□□ -1.83
HLA-DQB2P05538 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.61□□□□□ -1.83
HLA-DQB2P05538 RN7SKP18-201ENST00000516005 275 ntBASIC3.61□□□□□ -1.83
HLA-DQB2P05538 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.61□□□□□ -1.83
HLA-DQB2P05538 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DQB2P05538 MIR4738-201ENST00000579134 87 ntBASIC3.61□□□□□ -1.83
HLA-DQB2P05538 AC020914.6-201ENST00000594327 272 ntBASIC3.61□□□□□ -1.83
HLA-DQB2P05538 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DQB2P05538 U4.6-201ENST00000621618 127 ntBASIC3.61□□□□□ -1.83
HLA-DQB2P05538 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DQB2P05538 AC022893.2-201ENST00000564832 3296 ntBASIC3.61□□□□□ -1.83
HLA-DQB2P05538 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.61□□□□□ -1.83
HLA-DQB2P05538 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DQB2P05538 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DQB2P05538 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
HLA-DQB2P05538 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DQB2P05538 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
HLA-DQB2P05538 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.6□□□□□ -1.83
HLA-DQB2P05538 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DQB2P05538 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DQB2P05538 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
HLA-DQB2P05538 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HLA-DQB2P05538 FRG1CP-201ENST00000358464 769 ntBASIC3.6□□□□□ -1.83
HLA-DQB2P05538 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DQB2P05538 AL359837.1-201ENST00000381357 287 ntBASIC3.6□□□□□ -1.83
HLA-DQB2P05538 AC093719.1-202ENST00000392735 373 ntBASIC3.6□□□□□ -1.83
HLA-DQB2P05538 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DQB2P05538 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.6□□□□□ -1.83
HLA-DQB2P05538 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.6□□□□□ -1.83
HLA-DQB2P05538 AC073387.1-201ENST00000453261 709 ntBASIC3.6□□□□□ -1.83
HLA-DQB2P05538 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DQB2P05538 AC005726.1-201ENST00000494679 427 ntBASIC3.6□□□□□ -1.83
HLA-DQB2P05538 PRELID3BP7-201ENST00000503606 469 ntBASIC3.6□□□□□ -1.83
HLA-DQB2P05538 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.6□□□□□ -1.83
HLA-DQB2P05538 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.6□□□□□ -1.83
HLA-DQB2P05538 AC135001.1-201ENST00000544546 283 ntBASIC3.6□□□□□ -1.83
HLA-DQB2P05538 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.6□□□□□ -1.83
HLA-DQB2P05538 AC034105.4-201ENST00000568304 277 ntBASIC3.6□□□□□ -1.83
HLA-DQB2P05538 AC015911.5-201ENST00000587076 451 ntBASIC3.6□□□□□ -1.83
HLA-DQB2P05538 AC010591.1-201ENST00000603941 649 ntBASIC3.6□□□□□ -1.83
HLA-DQB2P05538 AP003355.3-201ENST00000623465 114 ntBASIC3.6□□□□□ -1.83
HLA-DQB2P05538 MIR6715B-201ENST00000637172 77 ntBASIC3.6□□□□□ -1.83
HLA-DQB2P05538 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.6□□□□□ -1.83
HLA-DQB2P05538 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.6□□□□□ -1.83
HLA-DQB2P05538 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DQB2P05538 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DQB2P05538 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DQB2P05538 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.6□□□□□ -1.83
HLA-DQB2P05538 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DQB2P05538 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DQB2P05538 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HLA-DQB2P05538 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DQB2P05538 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DQB2P05538 SNORA73.2-201ENST00000364946 201 ntBASIC3.59□□□□□ -1.83
HLA-DQB2P05538 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.59□□□□□ -1.83
HLA-DQB2P05538 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HLA-DQB2P05538 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DQB2P05538 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DQB2P05538 AC099336.2-201ENST00000422457 254 ntBASIC3.59□□□□□ -1.83
HLA-DQB2P05538 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.59□□□□□ -1.83
HLA-DQB2P05538 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DQB2P05538 RN7SL594P-201ENST00000470590 287 ntBASIC3.59□□□□□ -1.83
HLA-DQB2P05538 AC020593.1-201ENST00000507399 299 ntBASIC3.59□□□□□ -1.83
HLA-DQB2P05538 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC3.59□□□□□ -1.83
HLA-DQB2P05538 AC018797.3-201ENST00000513388 1241 ntBASIC3.59□□□□□ -1.83
HLA-DQB2P05538 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DQB2P05538 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DQB2P05538 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DQB2P05538 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DQB2P05538 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DQB2P05538 MTND2P13-201ENST00000577438 1039 ntBASIC3.59□□□□□ -1.83
HLA-DQB2P05538 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.59□□□□□ -1.83
HLA-DQB2P05538 AC022960.2-201ENST00000616300 666 ntBASIC3.59□□□□□ -1.83
HLA-DQB2P05538 AC112200.1-201ENST00000625015 234 ntBASIC3.59□□□□□ -1.83
HLA-DQB2P05538 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms