Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC6.51□□□□□ -1.37
RAPGEF3O95398 MIR1322-201ENST00000638013 71 ntBASIC6.51□□□□□ -1.37
RAPGEF3O95398 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RAPGEF3O95398 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RAPGEF3O95398 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RAPGEF3O95398 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
RAPGEF3O95398 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.51□□□□□ -1.37
RAPGEF3O95398 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
RAPGEF3O95398 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
RAPGEF3O95398 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RAPGEF3O95398 AC068870.3-201ENST00000625077 2536 ntBASIC6.5□□□□□ -1.37
RAPGEF3O95398 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.5□□□□□ -1.37
RAPGEF3O95398 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RAPGEF3O95398 AC024560.2-201ENST00000507981 1497 ntBASIC6.5□□□□□ -1.37
RAPGEF3O95398 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RAPGEF3O95398 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
RAPGEF3O95398 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RAPGEF3O95398 RNU6-543P-201ENST00000362576 108 ntBASIC6.5□□□□□ -1.37
RAPGEF3O95398 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.5□□□□□ -1.37
RAPGEF3O95398 GLS-204ENST00000409428 816 ntTSL 2 BASIC6.5□□□□□ -1.37
RAPGEF3O95398 AL008987.1-201ENST00000415528 237 ntBASIC6.5□□□□□ -1.37
RAPGEF3O95398 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC6.5□□□□□ -1.37
RAPGEF3O95398 EIF4HP2-201ENST00000424380 563 ntBASIC6.5□□□□□ -1.37
RAPGEF3O95398 RPL21P43-201ENST00000425440 472 ntBASIC6.5□□□□□ -1.37
RAPGEF3O95398 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.5□□□□□ -1.37
RAPGEF3O95398 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.5□□□□□ -1.37
RAPGEF3O95398 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC6.5□□□□□ -1.37
RAPGEF3O95398 FTH1P25-201ENST00000447665 469 ntBASIC6.5□□□□□ -1.37
RAPGEF3O95398 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.5□□□□□ -1.37
RAPGEF3O95398 RPL35AP15-201ENST00000468042 339 ntBASIC6.5□□□□□ -1.37
RAPGEF3O95398 RPL23AP37-201ENST00000479658 549 ntBASIC6.5□□□□□ -1.37
RAPGEF3O95398 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.5□□□□□ -1.37
RAPGEF3O95398 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC6.5□□□□□ -1.37
RAPGEF3O95398 RNU5A-4P-201ENST00000516588 111 ntBASIC6.5□□□□□ -1.37
RAPGEF3O95398 AC083923.1-201ENST00000523708 376 ntBASIC6.5□□□□□ -1.37
RAPGEF3O95398 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.5□□□□□ -1.37
RAPGEF3O95398 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RAPGEF3O95398 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.5□□□□□ -1.37
RAPGEF3O95398 CYCSP40-201ENST00000575927 294 ntBASIC6.5□□□□□ -1.37
RAPGEF3O95398 AC015688.2-201ENST00000584523 262 ntBASIC6.5□□□□□ -1.37
RAPGEF3O95398 AP001269.3-201ENST00000588718 329 ntBASIC6.5□□□□□ -1.37
RAPGEF3O95398 AC040904.1-201ENST00000590850 223 ntBASIC6.5□□□□□ -1.37
RAPGEF3O95398 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
RAPGEF3O95398 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RAPGEF3O95398 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RAPGEF3O95398 NSRP1P1-201ENST00000444067 1693 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RAPGEF3O95398 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
RAPGEF3O95398 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
RAPGEF3O95398 RNU5A-2P-201ENST00000384337 116 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 RPS20P14-201ENST00000412545 360 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.49□□□□□ -1.37
RAPGEF3O95398 REREP1Y-201ENST00000422655 198 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 YWHAEP5-201ENST00000431545 765 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC6.49□□□□□ -1.37
RAPGEF3O95398 CYCSP43-201ENST00000438233 310 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 AL008629.1-201ENST00000438615 184 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 REREP2Y-201ENST00000439103 200 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 SEPT7P3-201ENST00000455017 621 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 AC010468.1-201ENST00000461022 817 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 AC111193.1-201ENST00000504097 155 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.49□□□□□ -1.37
RAPGEF3O95398 AC113347.3-201ENST00000509113 148 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 snoZ278.1-201ENST00000517059 112 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.49□□□□□ -1.37
RAPGEF3O95398 AC026403.1-201ENST00000518938 295 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.49□□□□□ -1.37
RAPGEF3O95398 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RAPGEF3O95398 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
RAPGEF3O95398 AC008083.2-201ENST00000546707 476 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 AL358913.1-201ENST00000554342 121 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC6.49□□□□□ -1.37
RAPGEF3O95398 AC122134.1-201ENST00000565664 1104 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 AC015912.2-201ENST00000571053 181 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 AC022662.1-201ENST00000580252 331 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 DPRXP5-201ENST00000604662 539 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 AC024257.5-201ENST00000612739 531 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 AL356274.1-201ENST00000617064 410 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 AL354798.1-201ENST00000622505 329 ntBASIC6.49□□□□□ -1.37
RAPGEF3O95398 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC6.49□□□□□ -1.37
RAPGEF3O95398 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RAPGEF3O95398 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RAPGEF3O95398 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.48□□□□□ -1.37
RAPGEF3O95398 OR11H4-201ENST00000315409 1082 ntBASIC6.48□□□□□ -1.37
RAPGEF3O95398 OR5H2-201ENST00000355273 945 ntBASIC6.48□□□□□ -1.37
RAPGEF3O95398 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
RAPGEF3O95398 Y_RNA.111-201ENST00000363248 100 ntBASIC6.48□□□□□ -1.37
RAPGEF3O95398 PTMAP5-201ENST00000393073 333 ntBASIC6.48□□□□□ -1.37
RAPGEF3O95398 ERHP2-201ENST00000402323 299 ntBASIC6.48□□□□□ -1.37
RAPGEF3O95398 AL356131.1-201ENST00000405826 414 ntBASIC6.48□□□□□ -1.37
RAPGEF3O95398 RNU4-6P-201ENST00000410804 122 ntBASIC6.48□□□□□ -1.37
RAPGEF3O95398 TPT1P2-201ENST00000413105 503 ntBASIC6.48□□□□□ -1.37
RAPGEF3O95398 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.48□□□□□ -1.37
RAPGEF3O95398 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.48□□□□□ -1.37
RAPGEF3O95398 RAC1P8-201ENST00000427086 527 ntBASIC6.48□□□□□ -1.37
RAPGEF3O95398 CACYBPP1-201ENST00000438592 684 ntBASIC6.48□□□□□ -1.37
RAPGEF3O95398 NPM1P13-201ENST00000452663 865 ntBASIC6.48□□□□□ -1.37
RAPGEF3O95398 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC6.48□□□□□ -1.37
RAPGEF3O95398 AC007967.1-201ENST00000455422 1159 ntBASIC6.48□□□□□ -1.37
RAPGEF3O95398 USP9YP25-201ENST00000457708 443 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms