Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.94□□□□□ -1.62
PROM1O43490 AC108161.1-201ENST00000461060 402 ntBASIC4.94□□□□□ -1.62
PROM1O43490 AC116337.2-201ENST00000477662 156 ntBASIC4.94□□□□□ -1.62
PROM1O43490 AC011825.1-201ENST00000484967 388 ntBASIC4.94□□□□□ -1.62
PROM1O43490 AC109486.1-201ENST00000486833 374 ntBASIC4.94□□□□□ -1.62
PROM1O43490 UBA52P3-201ENST00000491303 382 ntBASIC4.94□□□□□ -1.62
PROM1O43490 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
PROM1O43490 AC090071.1-201ENST00000507713 644 ntBASIC4.94□□□□□ -1.62
PROM1O43490 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
PROM1O43490 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PROM1O43490 AP002963.1-201ENST00000530590 184 ntBASIC4.94□□□□□ -1.62
PROM1O43490 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.94□□□□□ -1.62
PROM1O43490 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.94□□□□□ -1.62
PROM1O43490 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.94□□□□□ -1.62
PROM1O43490 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.94□□□□□ -1.62
PROM1O43490 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.94□□□□□ -1.62
PROM1O43490 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.94□□□□□ -1.62
PROM1O43490 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.94□□□□□ -1.62
PROM1O43490 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.94□□□□□ -1.62
PROM1O43490 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.94□□□□□ -1.62
PROM1O43490 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.94□□□□□ -1.62
PROM1O43490 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.94□□□□□ -1.62
PROM1O43490 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.94□□□□□ -1.62
PROM1O43490 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PROM1O43490 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.94□□□□□ -1.62
PROM1O43490 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.94□□□□□ -1.62
PROM1O43490 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.94□□□□□ -1.62
PROM1O43490 MTCYBP22-201ENST00000603788 447 ntBASIC4.94□□□□□ -1.62
PROM1O43490 AC092354.1-201ENST00000606057 376 ntBASIC4.94□□□□□ -1.62
PROM1O43490 AC100793.4-201ENST00000613683 429 ntBASIC4.94□□□□□ -1.62
PROM1O43490 U6atac.1-201ENST00000616025 117 ntBASIC4.94□□□□□ -1.62
PROM1O43490 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PROM1O43490 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.94□□□□□ -1.62
PROM1O43490 AC090527.3-201ENST00000619041 548 ntBASIC4.94□□□□□ -1.62
PROM1O43490 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.94□□□□□ -1.62
PROM1O43490 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.94□□□□□ -1.62
PROM1O43490 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.94□□□□□ -1.62
PROM1O43490 AC015804.1-201ENST00000622935 435 ntBASIC4.94□□□□□ -1.62
PROM1O43490 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.94□□□□□ -1.62
PROM1O43490 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PROM1O43490 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.94□□□□□ -1.62
PROM1O43490 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.94□□□□□ -1.62
PROM1O43490 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PROM1O43490 AC093311.1-201ENST00000506586 2021 ntBASIC4.94□□□□□ -1.62
PROM1O43490 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PROM1O43490 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PROM1O43490 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.93□□□□□ -1.62
PROM1O43490 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PROM1O43490 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PROM1O43490 MAPK10-304ENST00000641341 3984 ntBASIC4.93□□□□□ -1.62
PROM1O43490 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
PROM1O43490 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PROM1O43490 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
PROM1O43490 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PROM1O43490 DDX18P4-201ENST00000511690 1966 ntBASIC4.93□□□□□ -1.62
PROM1O43490 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PROM1O43490 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
PROM1O43490 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PROM1O43490 IGKV7-3-201ENST00000357453 298 ntBASIC4.93□□□□□ -1.62
PROM1O43490 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
PROM1O43490 RNU5D-1-201ENST00000363299 116 ntBASIC4.93□□□□□ -1.62
PROM1O43490 OR52E6-202ENST00000379946 954 ntBASIC4.93□□□□□ -1.62
PROM1O43490 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
PROM1O43490 RNU6-1119P-201ENST00000384349 108 ntBASIC4.93□□□□□ -1.62
PROM1O43490 RNU6-146P-201ENST00000384602 108 ntBASIC4.93□□□□□ -1.62
PROM1O43490 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PROM1O43490 ATP5F1P4-201ENST00000397288 746 ntBASIC4.93□□□□□ -1.62
PROM1O43490 RPL21P67-201ENST00000402896 478 ntBASIC4.93□□□□□ -1.62
PROM1O43490 Y_RNA.604-201ENST00000410574 102 ntBASIC4.93□□□□□ -1.62
PROM1O43490 RN7SKP213-201ENST00000410746 298 ntBASIC4.93□□□□□ -1.62
PROM1O43490 CDK8P2-201ENST00000415020 547 ntBASIC4.93□□□□□ -1.62
PROM1O43490 RBMY2KP-201ENST00000418221 992 ntBASIC4.93□□□□□ -1.62
PROM1O43490 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.93□□□□□ -1.62
PROM1O43490 RPL12P34-201ENST00000424532 479 ntBASIC4.93□□□□□ -1.62
PROM1O43490 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.93□□□□□ -1.62
PROM1O43490 AC008072.1-201ENST00000434254 824 ntBASIC4.93□□□□□ -1.62
PROM1O43490 OR52B5P-201ENST00000435337 951 ntBASIC4.93□□□□□ -1.62
PROM1O43490 TMX2P1-201ENST00000436507 708 ntBASIC4.93□□□□□ -1.62
PROM1O43490 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.93□□□□□ -1.62
PROM1O43490 RPS29P10-201ENST00000439197 166 ntBASIC4.93□□□□□ -1.62
PROM1O43490 UBE2V1P5-201ENST00000440070 405 ntBASIC4.93□□□□□ -1.62
PROM1O43490 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.93□□□□□ -1.62
PROM1O43490 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.93□□□□□ -1.62
PROM1O43490 BX842559.2-201ENST00000451418 605 ntBASIC4.93□□□□□ -1.62
PROM1O43490 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.93□□□□□ -1.62
PROM1O43490 MTCO3P11-201ENST00000455103 774 ntBASIC4.93□□□□□ -1.62
PROM1O43490 AC093899.1-201ENST00000457984 376 ntBASIC4.93□□□□□ -1.62
PROM1O43490 AC245028.2-201ENST00000458673 253 ntBASIC4.93□□□□□ -1.62
PROM1O43490 RNA5SP103-201ENST00000459503 118 ntBASIC4.93□□□□□ -1.62
PROM1O43490 RPL7AP6-201ENST00000477943 801 ntBASIC4.93□□□□□ -1.62
PROM1O43490 RPSAP50-201ENST00000481955 852 ntBASIC4.93□□□□□ -1.62
PROM1O43490 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.93□□□□□ -1.62
PROM1O43490 AC072052.1-201ENST00000496556 306 ntBASIC4.93□□□□□ -1.62
PROM1O43490 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.93□□□□□ -1.62
PROM1O43490 GTF2F2P1-201ENST00000511083 675 ntBASIC4.93□□□□□ -1.62
PROM1O43490 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.93□□□□□ -1.62
PROM1O43490 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.93□□□□□ -1.62
PROM1O43490 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.93□□□□□ -1.62
PROM1O43490 IGKV2D-10-201ENST00000520194 281 ntBASIC4.93□□□□□ -1.62
PROM1O43490 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms