Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.18□□□□□ -1.42
SOX1O00570 AC068790.5-201ENST00000602741 355 ntBASIC6.18□□□□□ -1.42
SOX1O00570 AC145423.1-201ENST00000605712 336 ntBASIC6.18□□□□□ -1.42
SOX1O00570 MIR98-201ENST00000606724 119 ntBASIC6.18□□□□□ -1.42
SOX1O00570 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX1O00570 AL356274.1-201ENST00000617064 410 ntBASIC6.18□□□□□ -1.42
SOX1O00570 AL355974.3-201ENST00000617383 467 ntBASIC6.18□□□□□ -1.42
SOX1O00570 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX1O00570 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX1O00570 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX1O00570 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX1O00570 AC092821.3-202ENST00000641304 2767 ntBASIC6.18□□□□□ -1.42
SOX1O00570 AC025125.1-201ENST00000624743 1922 ntBASIC6.18□□□□□ -1.42
SOX1O00570 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SOX1O00570 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
SOX1O00570 AC119674.1-204ENST00000641348 1343 ntBASIC6.18□□□□□ -1.42
SOX1O00570 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX1O00570 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX1O00570 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.18□□□□□ -1.42
SOX1O00570 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX1O00570 AL589993.1-201ENST00000407450 2524 ntBASIC6.18□□□□□ -1.42
SOX1O00570 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX1O00570 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX1O00570 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX1O00570 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX1O00570 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SOX1O00570 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SOX1O00570 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SOX1O00570 AP001541.1-201ENST00000623322 1904 ntBASIC6.17□□□□□ -1.42
SOX1O00570 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX1O00570 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX1O00570 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.17□□□□□ -1.42
SOX1O00570 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX1O00570 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SOX1O00570 NLRP3P1-201ENST00000622303 1785 ntBASIC6.17□□□□□ -1.42
SOX1O00570 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.17□□□□□ -1.42
SOX1O00570 Y_RNA.159-201ENST00000363674 87 ntBASIC6.17□□□□□ -1.42
SOX1O00570 RNU6-777P-201ENST00000364265 104 ntBASIC6.17□□□□□ -1.42
SOX1O00570 RNA5SP478-201ENST00000364657 115 ntBASIC6.17□□□□□ -1.42
SOX1O00570 RNU6-282P-201ENST00000365357 103 ntBASIC6.17□□□□□ -1.42
SOX1O00570 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.17□□□□□ -1.42
SOX1O00570 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX1O00570 RNA5SP87-201ENST00000384155 118 ntBASIC6.17□□□□□ -1.42
SOX1O00570 RNU6-1151P-201ENST00000384684 107 ntBASIC6.17□□□□□ -1.42
SOX1O00570 MIR541-201ENST00000401360 84 ntBASIC6.17□□□□□ -1.42
SOX1O00570 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.17□□□□□ -1.42
SOX1O00570 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.17□□□□□ -1.42
SOX1O00570 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX1O00570 AC002075.1-201ENST00000457396 676 ntBASIC6.17□□□□□ -1.42
SOX1O00570 RPL23AP71-201ENST00000470966 469 ntBASIC6.17□□□□□ -1.42
SOX1O00570 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC6.17□□□□□ -1.42
SOX1O00570 RN7SKP147-201ENST00000517154 244 ntBASIC6.17□□□□□ -1.42
SOX1O00570 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX1O00570 COX6B1P6-201ENST00000522347 255 ntBASIC6.17□□□□□ -1.42
SOX1O00570 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.17□□□□□ -1.42
SOX1O00570 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.17□□□□□ -1.42
SOX1O00570 AC055876.1-202ENST00000567053 138 ntBASIC6.17□□□□□ -1.42
SOX1O00570 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX1O00570 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.17□□□□□ -1.42
SOX1O00570 AL953862.2-201ENST00000603089 820 ntBASIC6.17□□□□□ -1.42
SOX1O00570 AC138649.5-201ENST00000637456 137 ntBASIC6.17□□□□□ -1.42
SOX1O00570 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.17□□□□□ -1.42
SOX1O00570 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX1O00570 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX1O00570 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX1O00570 AC114947.2-201ENST00000565748 2125 ntBASIC6.17□□□□□ -1.42
SOX1O00570 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX1O00570 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.17□□□□□ -1.42
SOX1O00570 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SOX1O00570 MROH3P-201ENST00000435735 2676 ntBASIC6.17□□□□□ -1.42
SOX1O00570 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX1O00570 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.17□□□□□ -1.42
SOX1O00570 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.17□□□□□ -1.42
SOX1O00570 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX1O00570 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX1O00570 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX1O00570 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.17□□□□□ -1.42
SOX1O00570 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SOX1O00570 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SOX1O00570 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC6.16□□□□□ -1.42
SOX1O00570 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.16□□□□□ -1.42
SOX1O00570 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.16□□□□□ -1.42
SOX1O00570 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.16□□□□□ -1.42
SOX1O00570 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.16□□□□□ -1.42
SOX1O00570 AP000473.2-201ENST00000602659 1537 ntBASIC6.16□□□□□ -1.42
SOX1O00570 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
SOX1O00570 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SOX1O00570 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SOX1O00570 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.16□□□□□ -1.42
SOX1O00570 ZNF658B-201ENST00000602828 3408 ntBASIC6.16□□□□□ -1.42
SOX1O00570 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.16□□□□□ -1.42
SOX1O00570 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.16□□□□□ -1.42
SOX1O00570 Y_RNA.67-201ENST00000362870 100 ntBASIC6.16□□□□□ -1.42
SOX1O00570 RNU4-2-201ENST00000365668 141 ntBASIC6.16□□□□□ -1.42
SOX1O00570 RNA5SP339-201ENST00000390987 122 ntBASIC6.16□□□□□ -1.42
SOX1O00570 AC104297.1-201ENST00000393779 870 ntBASIC6.16□□□□□ -1.42
SOX1O00570 AL122016.1-201ENST00000403365 367 ntBASIC6.16□□□□□ -1.42
SOX1O00570 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SOX1O00570 RN7SKP32-201ENST00000410167 303 ntBASIC6.16□□□□□ -1.42
SOX1O00570 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms