Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RN7SL352P-201ENST00000466002 277 ntBASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 RPL23AP40-201ENST00000487630 390 ntBASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 RPL30P11-201ENST00000495304 339 ntBASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 AC008945.2-201ENST00000606056 604 ntBASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 AL118522.2-201ENST00000616045 615 ntBASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 MIR6864-201ENST00000617935 70 ntBASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 AP006248.2-201ENST00000623309 592 ntBASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 AC139792.3-201ENST00000623525 224 ntBASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 AP003122.6-201ENST00000623831 495 ntBASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AC027228.2-201ENST00000567141 2154 ntBASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 RNU6-1090P-201ENST00000364065 94 ntBASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 RNU6-1009P-201ENST00000390996 107 ntBASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 RPL23AP32-201ENST00000395315 459 ntBASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AL603766.1-201ENST00000407763 664 ntBASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 MTND3P17-201ENST00000416968 344 ntBASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AC016712.1-201ENST00000431088 378 ntBASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 PRPF38AP2-201ENST00000438179 851 ntBASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AC011753.3-201ENST00000443436 406 ntBASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AC132479.1-201ENST00000449160 144 ntBASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AC239809.1-201ENST00000450470 217 ntBASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AP000852.1-201ENST00000472460 573 ntBASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AC008628.2-201ENST00000502605 298 ntBASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AC114967.1-201ENST00000504890 259 ntBASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AK6P1-201ENST00000540219 478 ntBASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AC060780.3-201ENST00000589464 80 ntBASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 BX664608.1-201ENST00000610519 487 ntBASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AC104260.1-201ENST00000616660 539 ntBASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AL732618.1-201ENST00000623251 301 ntBASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AC099654.6-201ENST00000636487 512 ntBASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
TMEM88BA6NKF7 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
TMEM88BA6NKF7 ERCC6-202ENST00000374127 1782 ntBASIC6.69□□□□□ -1.34
TMEM88BA6NKF7 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.69□□□□□ -1.34
TMEM88BA6NKF7 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
TMEM88BA6NKF7 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TMEM88BA6NKF7 ZNF658B-201ENST00000602828 3408 ntBASIC6.69□□□□□ -1.34
TMEM88BA6NKF7 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TMEM88BA6NKF7 AL354685.2-201ENST00000448218 1447 ntBASIC6.69□□□□□ -1.34
TMEM88BA6NKF7 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.69□□□□□ -1.34
TMEM88BA6NKF7 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.69□□□□□ -1.34
TMEM88BA6NKF7 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC6.69□□□□□ -1.34
TMEM88BA6NKF7 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC6.69□□□□□ -1.34
TMEM88BA6NKF7 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.69□□□□□ -1.34
TMEM88BA6NKF7 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.69□□□□□ -1.34
TMEM88BA6NKF7 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.69□□□□□ -1.34
TMEM88BA6NKF7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TMEM88BA6NKF7 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
TMEM88BA6NKF7 RNA5SP391-201ENST00000363456 119 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms