Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 C2orf27A-204ENST00000623058 969 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 CR381572.1-201ENST00000625098 102 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AC134503.1-201ENST00000633048 54 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AC097714.1-201ENST00000511272 1647 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 AF287957.1-201ENST00000607368 1595 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 SNORA32.2-201ENST00000384049 122 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 RNU6-738P-201ENST00000384531 106 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 RPL32P23-201ENST00000397237 405 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 RPL7P60-201ENST00000397636 735 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 AL356421.1-201ENST00000403255 413 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 AL024474.1-201ENST00000404655 591 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 RPL31P52-201ENST00000407532 367 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 RN7SKP121-201ENST00000410842 305 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 AC127526.1-201ENST00000417526 366 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 RPL23AP30-201ENST00000432419 501 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 COL11A2P1-205ENST00000441798 676 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 RPL12P39-201ENST00000455456 496 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 RNU6-1218P-201ENST00000458990 108 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 RN7SL352P-201ENST00000466002 277 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 RN7SL369P-201ENST00000477138 299 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 RN7SL267P-201ENST00000485107 261 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 EIF4EP3-201ENST00000498782 656 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 SNX18P24-201ENST00000505249 671 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 AC112206.3-201ENST00000514578 389 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 RN7SKP116-201ENST00000516902 319 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 AC068714.1-201ENST00000559623 800 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 AC007151.1-201ENST00000572774 483 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 AC053481.3-201ENST00000577881 843 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 MIR4742-201ENST00000581069 85 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 AC098848.2-201ENST00000588023 330 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 AC104237.2-201ENST00000612456 443 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 AC130324.3-201ENST00000614165 542 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 AC004158.1-201ENST00000564508 4319 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 MTND5P33-201ENST00000571250 1450 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 SMG1P7-201ENST00000565246 2704 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 RBPJP7-201ENST00000442803 1447 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 RBPJP5-201ENST00000449433 1447 ntBASIC5.31□□□□□ -1.56
SHISA3A0PJX4 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHISA3A0PJX4 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms