Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 OR4G11P-202ENST00000642116 1414 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.21□□□□□ -1.57
PCDHGA3Q9Y5H0 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.21□□□□□ -1.57
PCDHGA3Q9Y5H0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
PCDHGA3Q9Y5H0 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.57
PCDHGA3Q9Y5H0 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
PCDHGA3Q9Y5H0 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
PCDHGA3Q9Y5H0 HSPA8P18-201ENST00000439846 1928 ntBASIC5.21□□□□□ -1.57
PCDHGA3Q9Y5H0 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 Y_RNA.194-201ENST00000363985 102 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 VDAC2P1-201ENST00000399358 958 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 HMGB1P17-201ENST00000403495 628 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AC004022.2-201ENST00000413824 193 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 SNRPEP7-201ENST00000438350 220 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 TRGVB-201ENST00000453257 471 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AL035090.1-201ENST00000454835 332 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 SNORD125-201ENST00000459538 96 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 ATP5LP5-201ENST00000483050 299 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 HMGN2P25-201ENST00000486956 268 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AC109462.1-201ENST00000491087 368 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 CDH12P4-201ENST00000517835 295 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 CDH12P3-201ENST00000517935 295 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 CDH12P1-201ENST00000518435 295 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AC087276.1-201ENST00000529659 480 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AP000873.5-201ENST00000533906 236 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AC007115.1-201ENST00000546853 234 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AC137768.1-201ENST00000549998 553 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 ROCK1P1-201ENST00000573767 549 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AC011260.1-201ENST00000578420 472 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AC103987.3-201ENST00000582071 292 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AC073544.2-201ENST00000601155 540 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AP001981.2-201ENST00000603241 418 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 TAS2R6P-201ENST00000605022 826 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 HSPE1P14-201ENST00000605812 302 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AL049539.1-201ENST00000611964 459 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 MIR6798-201ENST00000612887 67 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AC090527.3-201ENST00000619041 548 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AP002505.2-201ENST00000623585 696 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 KARSP3-201ENST00000571212 1504 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 ABCC13-202ENST00000463099 3842 ntBASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA3Q9Y5H0 AC131971.1-201ENST00000332881 1482 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AC023421.1-201ENST00000590535 1785 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AC112198.2-201ENST00000426589 6996 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 RNU4-91P-201ENST00000364778 135 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 RNU6-723P-201ENST00000383973 107 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AL590609.2-201ENST00000421430 368 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 SRSF1P1-201ENST00000424058 520 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 RPL36P19-201ENST00000430744 301 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 RPS20P1-201ENST00000434853 354 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 RPL23AP74-201ENST00000437246 471 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 TCEA1P3-201ENST00000443005 880 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms