Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 SNORA27.3-201ENST00000364937 134 ntBASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 RNU6-532P-201ENST00000384318 107 ntBASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 MIR320B1-201ENST00000390209 79 ntBASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 NDUFA5P10-201ENST00000432147 357 ntBASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 TRIM60P13-201ENST00000432350 1283 ntBASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 AC114878.1-201ENST00000441166 358 ntBASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 SAP18P1-201ENST00000512058 390 ntBASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 AC023632.4-201ENST00000517783 191 ntBASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 MED28P5-201ENST00000528254 438 ntBASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 HSPE1P5-201ENST00000561489 272 ntBASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 AC079171.1-201ENST00000568788 914 ntBASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 AC091167.4-201ENST00000605079 184 ntBASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 OR5AC4P-202ENST00000642086 985 ntBASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 AL627171.1-201ENST00000618845 1308 ntBASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 RNU6-213P-201ENST00000384051 104 ntBASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 HMGB3P5-201ENST00000428894 612 ntBASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 AC023512.1-201ENST00000444513 499 ntBASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 RPL7P31-201ENST00000450192 724 ntBASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 MTND3P4-201ENST00000453537 303 ntBASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 SNORA84-201ENST00000459229 133 ntBASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 RPL21P71-201ENST00000465598 459 ntBASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 AC091959.2-201ENST00000477363 321 ntBASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 AC109458.1-201ENST00000508858 316 ntBASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 RNU6-889P-201ENST00000517189 103 ntBASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 RNA5SP179-201ENST00000517284 121 ntBASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 MTCO1P49-201ENST00000523429 802 ntBASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 RFPL1S-203ENST00000539579 330 ntBASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 AC091516.1-201ENST00000549191 703 ntBASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 AC005255.1-201ENST00000593748 216 ntBASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 AC020914.4-201ENST00000597690 277 ntBASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 HMGB1P50-201ENST00000605814 607 ntBASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 AL356863.1-201ENST00000623378 1080 ntBASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 AC009452.1-201ENST00000640823 606 ntBASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 MARK2P15-201ENST00000432204 2186 ntBASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 ASNSP1-204ENST00000641977 1664 ntBASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 AC027287.1-201ENST00000553115 1453 ntBASIC4.69□□□□□ -1.66
CLIP2Q9UDT6 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 AC083899.2-201ENST00000423285 1376 ntBASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 SNORA62.2-201ENST00000364672 152 ntBASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 NPM1P10-201ENST00000398310 865 ntBASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 HMGB3P19-201ENST00000403971 560 ntBASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 RN7SKP159-201ENST00000410657 292 ntBASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 CYCSP19-201ENST00000411715 316 ntBASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 TCEA1P4-201ENST00000415066 844 ntBASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 CYP4F29P-201ENST00000420685 446 ntBASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 AC011742.1-201ENST00000431448 434 ntBASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 HMGB1P16-201ENST00000447155 540 ntBASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms