Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
CTSFQ9UBX1 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.83□□□□□ -1.8
CTSFQ9UBX1 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CTSFQ9UBX1 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.83□□□□□ -1.8
CTSFQ9UBX1 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
CTSFQ9UBX1 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
CTSFQ9UBX1 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CTSFQ9UBX1 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 HSPA8P1-201ENST00000425843 1833 ntBASIC3.82□□□□□ -1.8
CTSFQ9UBX1 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 AL353743.4-201ENST00000422653 1547 ntBASIC3.82□□□□□ -1.8
CTSFQ9UBX1 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 DCAF13P1-201ENST00000495256 1330 ntBASIC3.82□□□□□ -1.8
CTSFQ9UBX1 RNA5SP388-201ENST00000362584 119 ntBASIC3.82□□□□□ -1.8
CTSFQ9UBX1 MIR134-201ENST00000385258 73 ntBASIC3.82□□□□□ -1.8
CTSFQ9UBX1 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 RNU6-564P-201ENST00000410983 104 ntBASIC3.82□□□□□ -1.8
CTSFQ9UBX1 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 PTP4A1P5-201ENST00000420305 455 ntBASIC3.82□□□□□ -1.8
CTSFQ9UBX1 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 XKRYP6-201ENST00000440468 1116 ntBASIC3.82□□□□□ -1.8
CTSFQ9UBX1 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 XKRYP3-201ENST00000442113 1116 ntBASIC3.82□□□□□ -1.8
CTSFQ9UBX1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 EXTL2P1-201ENST00000446218 416 ntBASIC3.82□□□□□ -1.8
CTSFQ9UBX1 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 AC021146.7-201ENST00000509604 775 ntBASIC3.82□□□□□ -1.8
CTSFQ9UBX1 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 RNU7-143P-201ENST00000516781 65 ntBASIC3.82□□□□□ -1.8
CTSFQ9UBX1 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 AL606490.9-201ENST00000603331 271 ntBASIC3.82□□□□□ -1.8
CTSFQ9UBX1 LLPHP1-201ENST00000603571 367 ntBASIC3.82□□□□□ -1.8
CTSFQ9UBX1 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 AC055764.2-201ENST00000610089 670 ntBASIC3.82□□□□□ -1.8
CTSFQ9UBX1 AC105429.2-201ENST00000610567 517 ntBASIC3.82□□□□□ -1.8
CTSFQ9UBX1 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.82□□□□□ -1.8
CTSFQ9UBX1 MIR7702-201ENST00000621931 59 ntBASIC3.82□□□□□ -1.8
CTSFQ9UBX1 AC015726.3-201ENST00000624501 418 ntBASIC3.82□□□□□ -1.8
CTSFQ9UBX1 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 CDRT1-208ENST00000630868 794 ntBASIC3.82□□□□□ -1.8
CTSFQ9UBX1 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTSFQ9UBX1 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 MTND4P10-201ENST00000446199 1363 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 RPL32P23-201ENST00000397237 405 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 CCNB2P1-201ENST00000399411 1150 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 GSTA12P-201ENST00000402398 508 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 AL445189.1-201ENST00000405722 338 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 PGBD4P8-201ENST00000412993 562 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 JKAMPP1-201ENST00000413804 919 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 RFESDP1-201ENST00000422350 461 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 AL031736.2-201ENST00000426573 787 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 ELOCP8-201ENST00000439309 332 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 ELOCP15-201ENST00000442090 332 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 CDC27P1-201ENST00000445384 715 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 AL359073.1-201ENST00000448036 403 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 RPS11P1-201ENST00000451072 473 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 RPS4XP15-201ENST00000489210 795 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 RPL30P11-201ENST00000495304 339 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 ATG10-AS1-201ENST00000504846 648 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 MTATP6P22-201ENST00000507369 598 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 AC010285.3-201ENST00000511668 676 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 SNORA70.14-201ENST00000516205 110 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 AC093227.2-201ENST00000589357 285 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 MIR7973-1-201ENST00000614683 76 ntBASIC3.81□□□□□ -1.8
CTSFQ9UBX1 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms