Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ELOCP9-201ENST00000418624 239 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 RPL7P4-203ENST00000430239 730 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 VN1R108P-201ENST00000431580 830 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 MTCYBP42-201ENST00000444653 1130 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 AK3P4-201ENST00000504283 583 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 AC111000.3-201ENST00000508057 576 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 AC010486.3-201ENST00000511602 785 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 AC021146.3-201ENST00000511911 260 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 MTCO3P28-201ENST00000513351 515 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 AC118465.1-201ENST00000513820 1271 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 RNU1-6P-201ENST00000516290 144 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 RNA5SP392-201ENST00000516905 112 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 AL137072.1-201ENST00000603444 466 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 AC069304.3-201ENST00000603938 1084 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 Z94722.1-201ENST00000604328 474 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 AC010424.2-201ENST00000607594 443 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 AC009237.15-201ENST00000610252 501 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 FAM27B-201ENST00000610601 213 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 AC018926.3-201ENST00000618841 406 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 AC078883.4-201ENST00000623218 367 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 AC109454.4-201ENST00000623411 649 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 AL672167.1-203ENST00000641299 2975 ntBASIC4.74□□□□□ -1.65
NCKIPSDQ9NZQ3 MAPK10-286ENST00000641208 8747 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AC138393.1-206ENST00000540997 1886 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AL353743.4-201ENST00000422653 1547 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 LINC01355-201ENST00000566551 5444 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AC092435.4-201ENST00000623012 4159 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 Y_RNA.169-201ENST00000363745 96 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 RNA5SP332-201ENST00000391063 115 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 RNA5SP146-201ENST00000410743 123 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 FABP7P1-201ENST00000424004 391 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 RPL18P10-201ENST00000425606 538 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 HIGD1AP12-201ENST00000427832 281 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AC016712.1-201ENST00000431088 378 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AC091390.1-201ENST00000433904 331 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 TDGF1P1-201ENST00000445734 527 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 FTH1P2-201ENST00000466086 412 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 RPS23P7-201ENST00000466210 444 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 DEFB109F-201ENST00000491870 277 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AC104971.1-201ENST00000495117 578 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 SCARNA22-201ENST00000503991 125 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 Y_RNA.688-201ENST00000516565 95 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AC009643.1-201ENST00000532030 391 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AC125611.1-201ENST00000549563 229 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AL020997.3-201ENST00000602843 359 ntBASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.73□□□□□ -1.65
NCKIPSDQ9NZQ3 RPL26P30-202ENST00000602923 645 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms