Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCM2LQ9NUG4 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.19□□□□□ -1.58
CCM2LQ9NUG4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.19□□□□□ -1.58
CCM2LQ9NUG4 AC025574.1-201ENST00000554784 1653 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 SAMMSON-213ENST00000641336 1521 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 MTND4P4-201ENST00000439033 1366 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 AC007529.1-201ENST00000418574 2178 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 AL159987.1-201ENST00000347911 293 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 AL390316.1-201ENST00000406279 553 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 AC004022.2-201ENST00000413824 193 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 CDK8P2-201ENST00000415020 547 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 AC004448.2-201ENST00000422360 586 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 AC026410.2-201ENST00000460281 156 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 APOOP2-201ENST00000461561 539 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 MTND6P6-201ENST00000478031 263 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 AC093809.1-201ENST00000509155 340 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 MTND5P4-201ENST00000514978 288 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 BX510359.5-201ENST00000515651 304 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 AC068993.1-201ENST00000546724 589 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 AC063949.1-201ENST00000552900 865 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 HSPE1P3-201ENST00000559254 309 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 ZNF415P1-201ENST00000582279 1166 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 AC073869.8-201ENST00000641806 335 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 AL451142.2-201ENST00000429076 2090 ntBASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CCM2LQ9NUG4 AL031119.1-201ENST00000404707 1879 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AL360270.2-201ENST00000562952 5985 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 MTND4P16-201ENST00000466108 1367 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 RNU6-1119P-201ENST00000384349 108 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 RNU6-146P-201ENST00000384602 108 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AL121972.1-201ENST00000402023 252 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 VN1R8P-201ENST00000407739 893 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 RPS27AP14-201ENST00000422868 454 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 COX6CP15-201ENST00000426313 211 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 MTCO3P30-201ENST00000426425 670 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AL022331.1-201ENST00000429025 477 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AC126120.1-201ENST00000431082 470 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AC105402.2-201ENST00000438503 358 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 UBE2V1P3-201ENST00000439651 417 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AL592447.1-201ENST00000447592 540 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 ARPC3P5-201ENST00000448802 534 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 SSXP1-201ENST00000453640 473 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 FAM172BP-201ENST00000487497 1089 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 NDUFA5P12-201ENST00000503796 343 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms