Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 RNU2-17P-201ENST00000410290 190 ntBASIC4.33□□□□□ -1.72
HPS4Q9NQG7 MIR1911-201ENST00000410783 80 ntBASIC4.33□□□□□ -1.72
HPS4Q9NQG7 CYCSP19-201ENST00000411715 316 ntBASIC4.33□□□□□ -1.72
HPS4Q9NQG7 MTATP6P19-201ENST00000413797 659 ntBASIC4.33□□□□□ -1.72
HPS4Q9NQG7 OR8F1P-201ENST00000425243 930 ntBASIC4.33□□□□□ -1.72
HPS4Q9NQG7 RPL7P2-201ENST00000427639 268 ntBASIC4.33□□□□□ -1.72
HPS4Q9NQG7 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 CBX1P4-201ENST00000439415 457 ntBASIC4.33□□□□□ -1.72
HPS4Q9NQG7 RPS29P7-201ENST00000439662 171 ntBASIC4.33□□□□□ -1.72
HPS4Q9NQG7 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 MTND2P30-201ENST00000456663 382 ntBASIC4.33□□□□□ -1.72
HPS4Q9NQG7 RPL21P71-201ENST00000465598 459 ntBASIC4.33□□□□□ -1.72
HPS4Q9NQG7 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 RN7SL604P-201ENST00000492589 296 ntBASIC4.33□□□□□ -1.72
HPS4Q9NQG7 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 AC006499.6-201ENST00000511169 607 ntBASIC4.33□□□□□ -1.72
HPS4Q9NQG7 RNU1-45P-201ENST00000517191 141 ntBASIC4.33□□□□□ -1.72
HPS4Q9NQG7 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 AC090281.1-201ENST00000523019 276 ntBASIC4.33□□□□□ -1.72
HPS4Q9NQG7 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 AC006064.5-201ENST00000541782 248 ntBASIC4.33□□□□□ -1.72
HPS4Q9NQG7 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 AC243654.2-201ENST00000612843 443 ntBASIC4.33□□□□□ -1.72
HPS4Q9NQG7 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 AC024023.1-201ENST00000624530 922 ntBASIC4.33□□□□□ -1.72
HPS4Q9NQG7 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 NOL8P1-201ENST00000508336 3529 ntBASIC4.33□□□□□ -1.72
HPS4Q9NQG7 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 OTUD4P1-201ENST00000237841 3067 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 GTF2H2B-203ENST00000508065 1432 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 OR11H4-201ENST00000315409 1082 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 RNU6-252P-201ENST00000363232 107 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 RNA5SP22-201ENST00000365393 109 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 RHOT1P2-201ENST00000366423 333 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 GCNT6-201ENST00000379591 934 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 MIR554-201ENST00000384874 96 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 RNA5SP171-201ENST00000391071 115 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 SNORD66.1-201ENST00000391230 76 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 HMGB1P10-201ENST00000395823 563 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 VN1R8P-201ENST00000407739 893 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 AP000357.1-201ENST00000409926 1165 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 USP9YP19-201ENST00000412165 485 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 LINC01881-201ENST00000416103 412 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 AC004552.1-201ENST00000419089 348 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 MTATP6P11-201ENST00000428071 670 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 MED6P1-201ENST00000439659 713 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 RRM2P4-201ENST00000441721 562 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 RPS27AP15-201ENST00000447672 466 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 AL353718.1-201ENST00000451028 517 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 RPS26P3-201ENST00000470205 348 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 AC007688.1-201ENST00000475592 759 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 AC090543.2-201ENST00000483963 348 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 AC090013.1-201ENST00000485147 480 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 AC004057.1-201ENST00000485827 348 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 RPS6P4-201ENST00000494693 758 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 AP002812.1-201ENST00000495378 474 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 AC010460.1-201ENST00000507087 466 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 IGHV3-32-201ENST00000519182 355 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 ZNF92P3-201ENST00000596594 954 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 AC008638.3-201ENST00000603341 463 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 MIR7151-201ENST00000617477 60 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 AP006248.3-201ENST00000623580 594 ntBASIC4.32□□□□□ -1.72
HPS4Q9NQG7 FRG1DP-201ENST00000635586 771 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms