Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.41□□□□□ -1.86
CHD8Q9HCK8 AC010591.1-201ENST00000603941 649 ntBASIC3.41□□□□□ -1.86
CHD8Q9HCK8 AC104662.1-201ENST00000604448 511 ntBASIC3.41□□□□□ -1.86
CHD8Q9HCK8 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CHD8Q9HCK8 AC103798.2-201ENST00000624292 632 ntBASIC3.41□□□□□ -1.86
CHD8Q9HCK8 AC006971.1-201ENST00000407916 4486 ntBASIC3.41□□□□□ -1.86
CHD8Q9HCK8 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.41□□□□□ -1.86
CHD8Q9HCK8 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CHD8Q9HCK8 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
CHD8Q9HCK8 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.41□□□□□ -1.86
CHD8Q9HCK8 OR1S2-201ENST00000302592 978 ntBASIC3.41□□□□□ -1.86
CHD8Q9HCK8 RPL21P40-201ENST00000428586 483 ntBASIC3.41□□□□□ -1.86
CHD8Q9HCK8 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.41□□□□□ -1.86
CHD8Q9HCK8 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.41□□□□□ -1.86
CHD8Q9HCK8 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.41□□□□□ -1.86
CHD8Q9HCK8 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CHD8Q9HCK8 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CHD8Q9HCK8 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CHD8Q9HCK8 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CHD8Q9HCK8 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CHD8Q9HCK8 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CHD8Q9HCK8 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CHD8Q9HCK8 RPS23P10-201ENST00000416185 486 ntBASIC3.4□□□□□ -1.86
CHD8Q9HCK8 AC009414.1-201ENST00000427200 443 ntBASIC3.4□□□□□ -1.86
CHD8Q9HCK8 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.4□□□□□ -1.86
CHD8Q9HCK8 AC006028.1-201ENST00000438379 402 ntBASIC3.4□□□□□ -1.86
CHD8Q9HCK8 AC109925.1-201ENST00000478069 331 ntBASIC3.4□□□□□ -1.86
CHD8Q9HCK8 RNA5SP24-201ENST00000516478 95 ntBASIC3.4□□□□□ -1.86
CHD8Q9HCK8 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.4□□□□□ -1.86
CHD8Q9HCK8 AL353726.1-201ENST00000614041 1000 ntBASIC3.4□□□□□ -1.86
CHD8Q9HCK8 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.4□□□□□ -1.86
CHD8Q9HCK8 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.4□□□□□ -1.86
CHD8Q9HCK8 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CHD8Q9HCK8 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.4□□□□□ -1.87
CHD8Q9HCK8 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
CHD8Q9HCK8 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.4□□□□□ -1.87
CHD8Q9HCK8 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC3.4□□□□□ -1.87
CHD8Q9HCK8 AC087190.4-201ENST00000574616 8334 ntBASIC3.4□□□□□ -1.87
CHD8Q9HCK8 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
CHD8Q9HCK8 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CHD8Q9HCK8 AC079171.1-201ENST00000568788 914 ntBASIC3.4□□□□□ -1.87
CHD8Q9HCK8 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.4□□□□□ -1.87
CHD8Q9HCK8 AC016839.1-201ENST00000578162 867 ntBASIC3.4□□□□□ -1.87
CHD8Q9HCK8 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC3.4□□□□□ -1.87
CHD8Q9HCK8 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CHD8Q9HCK8 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
CHD8Q9HCK8 AC134882.1-201ENST00000603738 1676 ntBASIC3.4□□□□□ -1.87
CHD8Q9HCK8 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CHD8Q9HCK8 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 SMC4P1-201ENST00000414479 527 ntBASIC3.39□□□□□ -1.87
CHD8Q9HCK8 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 AC233981.1-201ENST00000423224 461 ntBASIC3.39□□□□□ -1.87
CHD8Q9HCK8 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 snoU13.15-201ENST00000459407 104 ntBASIC3.39□□□□□ -1.87
CHD8Q9HCK8 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 AC064859.1-201ENST00000624741 174 ntBASIC3.39□□□□□ -1.87
CHD8Q9HCK8 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 AL137918.1-201ENST00000624542 1922 ntBASIC3.39□□□□□ -1.87
CHD8Q9HCK8 AC063923.1-201ENST00000478982 1619 ntBASIC3.39□□□□□ -1.87
CHD8Q9HCK8 DHX9P1-201ENST00000436565 3076 ntBASIC3.39□□□□□ -1.87
CHD8Q9HCK8 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 OR5J1P-201ENST00000313544 939 ntBASIC3.39□□□□□ -1.87
CHD8Q9HCK8 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.39□□□□□ -1.87
CHD8Q9HCK8 OSTCP5-201ENST00000425293 453 ntBASIC3.39□□□□□ -1.87
CHD8Q9HCK8 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 RPL7P48-201ENST00000461513 746 ntBASIC3.39□□□□□ -1.87
CHD8Q9HCK8 AC084198.1-201ENST00000477747 402 ntBASIC3.39□□□□□ -1.87
CHD8Q9HCK8 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 RPS4XP18-201ENST00000495480 763 ntBASIC3.39□□□□□ -1.87
CHD8Q9HCK8 AC026801.2-201ENST00000515352 425 ntBASIC3.39□□□□□ -1.87
CHD8Q9HCK8 AC106734.1-201ENST00000568646 663 ntBASIC3.39□□□□□ -1.87
CHD8Q9HCK8 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CHD8Q9HCK8 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CHD8Q9HCK8 THAP12P5-201ENST00000405864 2275 ntBASIC3.38□□□□□ -1.87
CHD8Q9HCK8 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.38□□□□□ -1.87
CHD8Q9HCK8 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHD8Q9HCK8 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CHD8Q9HCK8 Y_RNA.540-201ENST00000384638 111 ntBASIC3.38□□□□□ -1.87
CHD8Q9HCK8 UBTFL3-201ENST00000418934 1024 ntBASIC3.38□□□□□ -1.87
CHD8Q9HCK8 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.38□□□□□ -1.87
CHD8Q9HCK8 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC3.38□□□□□ -1.87
CHD8Q9HCK8 AL133477.1-201ENST00000457472 514 ntBASIC3.38□□□□□ -1.87
CHD8Q9HCK8 UBTFL6-201ENST00000477929 1024 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms